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SCNpilot_cont_750_bf_scaffold_32429_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3..323

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSL3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 99.0
  • Bit_score: 184
  • Evalue 5.10e-44
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 99.0
  • Bit_score: 184
  • Evalue 7.10e-44
integration host factor, beta subunit similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 97.0
  • Bit_score: 183
  • Evalue 2.70e-44

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ACGTCACGGACATTGGGGCCCATGACCAAATCCGAATTGATCGAAGCGCTGGCCAGGCGCCAGACCCACCTCGCGTTCGCCGACGTCGAGATGGCCGTCAAGAGCGTCATCGAACAGATGAGCCTGGCGCTGGCCCAGGGCGAACGCATCGAGGTGCGCGGCTTCGGCAGCTTTGCGTTGCACTACCGGCCGCCGCGGATGGGGCGCAACCCCAAGACCGGCGAAGCCGTGGCCCTGCCAGGCAAGCACGTTCCCCATTTCAAGCCGGGCAAGGAATTGCGCGAGCGCGTCAATCTTGATCTGGAGAACAGTGCCGGTTGA
PROTEIN sequence
Length: 107
TSRTLGPMTKSELIEALARRQTHLAFADVEMAVKSVIEQMSLALAQGERIEVRGFGSFALHYRPPRMGRNPKTGEAVALPGKHVPHFKPGKELRERVNLDLENSAG*