ggKbase home page

SCNpilot_cont_750_bf_scaffold_4293_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1146..1751)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDCA similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 194.0
  • Bit_score: 277
  • Evalue 1.40e-71
TonB-dependent receptor {ECO:0000313|EMBL:AJP73050.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 197.0
  • Bit_score: 293
  • Evalue 2.10e-76
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 184.0
  • Bit_score: 203
  • Evalue 8.20e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGCGCACGCTGGTGCTGCTCGACGGGCGCCGTTCGGTCGCCTCGACGATCAACGGGCTGGTCGACGTCAACACGATCCCGCAATCCCTGATCGAGCGGGTCGATGTCGTCACCGGCGGCGCCTCCGCGGCCTATGGCTCGGACGCGGTCGCGGGCGTGGTCAATTTCGTCCTCAACAAGAAGTTCCAGGGGCTCAAGGTCGCGGCGGATTCGGGCATCACCGGGCACGGCGACGGCGGCAATTATTCGATCAACGTCACCGGCGGCACCTCCTTCGCCGGCGGGCGCGGGCATATCATCCTCAACGGAGAGGTCGCGCATGCCGACGGCATCTTCAACGTCGATCGCGACTGGAACGCGACCGGCTATGTCCGCATCCAGGACCCCAATTGGACCACGAACAGCACCACCCCGCGCTATCTGATCCGCACCCAGGTCGGCGCGGCCAATTCGACCCCCGGGGGGCTGATCACCGGTTCGAGCGGCGGCGTCGCCAACCGGCTGCGCGGGATCTATTTCGGCCAAGGCGGGTCGGTGAACCATTATCAATATGGCGCACTGGCAGGTCAACGATTCGGGCCGCCGCATCGGCCTTGCCCCGCGTGA
PROTEIN sequence
Length: 202
MRTLVLLDGRRSVASTINGLVDVNTIPQSLIERVDVVTGGASAAYGSDAVAGVVNFVLNKKFQGLKVAADSGITGHGDGGNYSINVTGGTSFAGGRGHIILNGEVAHADGIFNVDRDWNATGYVRIQDPNWTTNSTTPRYLIRTQVGAANSTPGGLITGSSGGVANRLRGIYFGQGGSVNHYQYGALAGQRFGPPHRPCPA*