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SCNpilot_cont_750_bf_scaffold_9024_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(2..652)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488550 similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 221.0
  • Bit_score: 127
  • Evalue 1.50e-26
DNA, contig: SP659 {ECO:0000313|EMBL:GAN15534.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 206.0
  • Bit_score: 121
  • Evalue 1.50e-24
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 218.0
  • Bit_score: 113
  • Evalue 7.00e-23

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGACCGACGCCCCTGACAGCCCCGATCCGCCCGCCGGCACATCGGTCGACGAGTTCCTCGGCACCAAGCCCGGCGGGTCGTGGGGCTGGTGGATAAGGTGGCTTTCGATCGGGCTCGCCGGGGTCGTGCTGATCGTTCTCGTCGGCCGGTTCGTGAGCGGCGGGCTGGCGACCGAATATGCCTCTGAGCCGGTCACGCGCGTCGACATCCCGCTGAAACTGTTCGGCAGCGGGCGGCTGCAACCCGTCGCGGTGCATCTCGTCGATGCCGGGCAGGAAGGCGTGATCCGCGCGATCCCGGTCGCGGACAACCAGCCGGTGAACGCGGGTGATATCCTCGCCCGGCTCGATCCGGCGCCGCTGCGGGAAGCGATCGCCGCAGCGCGGGAACTGCTCGACACGCGGCAGGCGGCGCTGGCCAAGGCGCAGGCGACGAAAGCGGATGTCGACGCGCGGCTGGGGCTTTATCAACGCGTGCGCCGGCGCTCGGGCGGCAGTGTCCCATCCGATCGCGAAATGACCGCCGCGCAGGATGCCGCGCGACGCGCCGCCGATGCGGTCGATACCGCGCAGGTGGAACTCGCCGCCGCGCGCACCGCGCTGAGCGAACGGGAGGCGCAACTCGCCTCGGCGGATATCCGCGCCCCCGTC
PROTEIN sequence
Length: 217
MTDAPDSPDPPAGTSVDEFLGTKPGGSWGWWIRWLSIGLAGVVLIVLVGRFVSGGLATEYASEPVTRVDIPLKLFGSGRLQPVAVHLVDAGQEGVIRAIPVADNQPVNAGDILARLDPAPLREAIAAARELLDTRQAALAKAQATKADVDARLGLYQRVRRRSGGSVPSDREMTAAQDAARRAADAVDTAQVELAAARTALSEREAQLASADIRAPV