ggKbase home page

SCNpilot_cont_750_bf_scaffold_11013_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(287..652)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 121.0
  • Bit_score: 187
  • Evalue 1.30e-44
twitching motility protein PilT n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000314419D similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 121.0
  • Bit_score: 184
  • Evalue 5.80e-44
twitching motility protein PilT; K07062 similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 121.0
  • Bit_score: 162
  • Evalue 7.40e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GTGTCCGACCCGTTCTTCGACACCAATATCCTGGTCGACTGGCTGTTCGGCCGCGCCGAGGCGATCGGCGAGCTCGGGCGCTATTCGCGGCATCGCATCAGCCGCATCGTCTGGACCGAATTGCTCGCTGGCGAGCCCCCGGAGACGCGCAGCGAGATCCAGGCGCTGCTCCAGCCGTTCGAGGTGGTGGAAATCGACCAGCGCATCGCCAGATTGGCGGCGGACATCCGTCAGCGGATGCGGATGACCTTGCTCGATGCCTTCATCCTGGCGACGGCGCAGGTTAATGGGGCGATCCTGGTAACGCGTAATACCAAAGACTTTCCGGCGACGATGCCGGGGGTCCGCATTCCCTACACACTCTAG
PROTEIN sequence
Length: 122
VSDPFFDTNILVDWLFGRAEAIGELGRYSRHRISRIVWTELLAGEPPETRSEIQALLQPFEVVEIDQRIARLAADIRQRMRMTLLDAFILATAQVNGAILVTRNTKDFPATMPGVRIPYTL*