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SCNpilot_cont_750_bf_scaffold_12087_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(221..1150)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VH98_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 299.0
  • Bit_score: 247
  • Evalue 1.80e-62
Transcriptional regulator of lysR family {ECO:0000313|EMBL:GAO53244.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 288.0
  • Bit_score: 421
  • Evalue 1.30e-114
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 299.0
  • Bit_score: 247
  • Evalue 5.80e-63

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGACTTTTGATCAACGCCAGTTGCGCGCCTTTCTCGCGGTGGTCGACCGCGGCAGCCTGGGGCGCGCGGCCGATGTCGCGTGCATGACGCAACCCGCGCTCAGTCGGCTGATCGGCGAGATGGAGCGGCGCTTCGGCCAGCGACTGTTCGATCGTCACAGCAAGGGCATGGTGCCCACGGCGGCGGGTGAGACGCTGATCCCCCATGCCAGATTGCTATTGTTCGAGATGGAGCAGGCGGCTTCGGCGCTGGATGCGTTGCGCGGCCTCGGGCGGGGGCGGTTGCGCGTGGGCGCGGTGGCGGCGATCGCGCGGACGATCCTCCCCGCAATCGCCGCGCGCCTGCTGGATGCAGCGCCGAAATTGCAGGTCGATGTGCTCGACGCACCCGAGGACCGGCTTGTCCAGGCGTTGACGGGGCGTGAGATCGACGTGGTGATCGCCCCGGCAATCGCGCCGCATCCCGAAATCCGGCCGATCGCCGAACTCGATTATAAAGACAGCTACACTGTGCTCGCCGCCGCCGCGCACCCGCTCGCGCATCGTGCCGATGTCGGGCTGGACGACGTGCTCGGCGAGCGCTGGGCGATGCCCGAGATCGGCAGCGCACCGCGCATGTTGTTCCACAATCTGGTCACCGCGCAGGGCGGGGCGTTGCCGGATGTCGCGGTGGAAACCAATTCAATCGGCGTGATGCTCGCCACCGTTTCCTCCAGCCGATTGCTCGGCTGGCTGCCCAAACCCTTGATCGGCGCGGAGATGGAGCGGGGGCTGATCGCGGCGATCGGCATTCCCGTGCTCGAGGTCGAGCGCCGCTTCTTCGTCTATACCCGCCGCAAGGGCAGTCTGATCGCCGCTGCTCATCGCCTGTTCGATCTGCTTCCGCTGAGCAGCCGTGCGGTCGCCGCGCCGTCATGCGGCTTGCCGTGA
PROTEIN sequence
Length: 310
MTFDQRQLRAFLAVVDRGSLGRAADVACMTQPALSRLIGEMERRFGQRLFDRHSKGMVPTAAGETLIPHARLLLFEMEQAASALDALRGLGRGRLRVGAVAAIARTILPAIAARLLDAAPKLQVDVLDAPEDRLVQALTGREIDVVIAPAIAPHPEIRPIAELDYKDSYTVLAAAAHPLAHRADVGLDDVLGERWAMPEIGSAPRMLFHNLVTAQGGALPDVAVETNSIGVMLATVSSSRLLGWLPKPLIGAEMERGLIAAIGIPVLEVERRFFVYTRRKGSLIAAAHRLFDLLPLSSRAVAAPSCGLP*