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SCNpilot_cont_750_bf_scaffold_19647_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(97..804)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037B04BE similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 224.0
  • Bit_score: 334
  • Evalue 1.10e-88
  • rbh
DNA, contig: SP636 {ECO:0000313|EMBL:GAN14348.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 232.0
  • Bit_score: 320
  • Evalue 2.40e-84
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 225.0
  • Bit_score: 270
  • Evalue 4.90e-70

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGAGCGTTTCCGACGCTTATGCCCGCGTCATGCCCCGCATCCTGGTGATCGAGGACGACATAGGCACCGCGCGCGAGATCGCCGCGGAACTGGCCGGGCATGGCCATGACGTGACGATCGCTCGCGACGGGGCGACCGGACTCGACCGCGCGACCCGCGAAGGGTTCGACGCGATCACGCTCGACCGCATGCTCCCCGCGGTCGACGGGCTCGAGGTGGTGCGCATCCTGCGCGAGCGCCGCATCACCACCCCCGTCCTGATGATCAGCGCGCTGAGCGACGTCGACGAGCGGATCGCCGGGCTTCGCGCCGGGGGCGACGATTATCTCATCAAACCCTTCGCCCCCAATGAGATGGCGATGCGTGTCGAGGTGCTGATCCGGCGTCATCACGATCGCGCGGATACGATGCTGCTGCGCGCCGGCGATATCGAGCTCGATCTGGTGCGGCGCACCGTGCATGTCGCGGGCGAGGCCGTCCGGCTGCTCCATATGGAATTTCGCCTGCTCGAATTCCTGATGCGCAACCGGGGCGAGGTGGTCAGCCGGCGGATCATCTTCGAGCAGGTGTGGGGCTATTATTTCGATCCCGGCGCCAATCTGATCAACGTCCATATCGCGCGGCTGCGCAAGAAGCTCGATCGCCCCGGCGCGCCTTCGGCGATCCAGACGATCAAAGGCGAAGGCTATCGGCTGGATGCTGGCTGA
PROTEIN sequence
Length: 236
VSVSDAYARVMPRILVIEDDIGTAREIAAELAGHGHDVTIARDGATGLDRATREGFDAITLDRMLPAVDGLEVVRILRERRITTPVLMISALSDVDERIAGLRAGGDDYLIKPFAPNEMAMRVEVLIRRHHDRADTMLLRAGDIELDLVRRTVHVAGEAVRLLHMEFRLLEFLMRNRGEVVSRRIIFEQVWGYYFDPGANLINVHIARLRKKLDRPGAPSAIQTIKGEGYRLDAG*