ggKbase home page

SCNpilot_cont_750_bf_scaffold_41

Search features with annotation key words

Displaying items 31-60 of 357 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_41_31

Not on your lists

32550..32861
DNA (312bp) protein (104aa)
NADH dehydrogenase I, K subunit; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=NUOK_ACIC5
Uncharacterized protein {ECO:0000313|EMBL:KKM64680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_750_bf_scaffold_41_32
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

32991..35573
DNA (2583bp) protein (861aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:ACZ42439.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ACZ42439.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCC4_THET1
SCNpilot_cont_750_bf_scaffold_41_33
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

35606..37471
DNA (1866bp) protein (622aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
NADH-quinone oxidoreductase, subunit M n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDM8_9CHLR rbh
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_750_bf_scaffold_41_34
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

37520..39079
DNA (1560bp) protein (520aa)
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6X9_SPHTD rbh
SCNpilot_cont_750_bf_scaffold_41_35
unknown

Not on your lists

39230..39595
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_41_36
unknown

Not on your lists

39610..39960
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_41_37
unknown

Not on your lists

40010..40345
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_41_38
unknown

Not on your lists

40401..40673
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_41_39
unknown

Not on your lists

40670..41302
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_41_40
Raphidiopsis brookii, Raphidiopsis, Nostocales, Cyanobacteria, Bacteria

Not on your lists

41423..41812
DNA (390bp) protein (130aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Raphidiopsis brookii D9 RepID=D4TQ73_9NOST
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFA73395.1}; TaxID=533247 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Raphidiopsis.;" source="Raphidiopsis brookii D9.;"
SCNpilot_cont_750_bf_scaffold_41_41
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

41854..42783
DNA (930bp) protein (310aa)
ketopantoate reductase ApbA/PanE (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8B2Q8_PSEAI
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
SCNpilot_cont_750_bf_scaffold_41_42
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

42797..43300
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J5H6_FRASC
hypothetical protein
Tax=RBG_13_Chloroflexi_66_10_curated
SCNpilot_cont_750_bf_scaffold_41_43
Guillardia theta, Guillardia, Pyrenomonadales, Cryptophyta, Eukaryota

Not on your lists

comp(43302..44303)
DNA (1002bp) protein (334aa)
aminoglycoside phosphotransferase; K02204 homoserine kinase type II [EC:2.7.1.39]
Uncharacterized protein n=1 Tax=Guillardia theta CCMP2712 RepID=L1IQY9_GUITH
Uncharacterized protein {ECO:0000313|EMBL:EKX38274.1, ECO:0000313|EnsemblProtists:EKX38274}; TaxID=905079 species="Eukaryota; Cryptophyta; Pyrenomonadales; Geminigeraceae; Guillardia.;" source="Guillardia theta CCMP2712.;"
SCNpilot_cont_750_bf_scaffold_41_44

Not on your lists

comp(44296..45009)
DNA (714bp) protein (238aa)
Putative TPR repeat family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UGI0_9RHOB
Marine sediment metagenome DNA, contig: S01H1_S12799 {ECO:0000313|EMBL:GAF99820.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
serine/threonine protein kinase containing TPR domain
SCNpilot_cont_750_bf_scaffold_41_45
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

45232..46962
DNA (1731bp) protein (577aa)
polX; DNA polymerase/3'-5' exonuclease PolX (EC:2.7.7.7) rbh
DNA polymerase/3'-5' exonuclease PolX n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LU48_THEPS rbh
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
SCNpilot_cont_750_bf_scaffold_41_46
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(46959..48230)
DNA (1272bp) protein (424aa)
Glycosyl transferase group 1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHH1_ROSCS
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABU56918.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_750_bf_scaffold_41_47
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48297..49295)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N0V2_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KJK57519.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_41_48
Streptomyces sp. 275, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49354..49878)
DNA (525bp) protein (175aa)
Pad R-like family/HTH family transcriptional regulator n=1 Tax=Streptomyces sp. 275 RepID=M1RNC2_9ACTO
Pad R-like family/HTH family transcriptional regulator {ECO:0000313|EMBL:AGG12549.1}; TaxID=255709 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 275.;"
putative transcriptional regulator
SCNpilot_cont_750_bf_scaffold_41_49
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(49994..51316)
DNA (1323bp) protein (441aa)
Peptidase U62, modulator of DNA gyrase id=2037492 bin=GWB2_Chloroflexi_49_20 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good rbh
putative Zn-dependent protease-like protein
Tax=GWC2_Chloroflexi_49_37_curated
SCNpilot_cont_750_bf_scaffold_41_50
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(51328..52716)
DNA (1389bp) protein (463aa)
Peptidase id=2026683 bin=GWD2_Chloroflexi_49_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + rbh
tldD; peptidase U62 modulator of DNA gyrase rbh
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_cont_750_bf_scaffold_41_51
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(52881..54872)
DNA (1992bp) protein (664aa)
protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEP8_9CHLR
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_cont_750_bf_scaffold_41_52
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(55212..55805)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRJ5_9CHLR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH85947.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_41_53
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(55842..56606)
DNA (765bp) protein (255aa)
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKG6_RHOM4
SCNpilot_cont_750_bf_scaffold_41_54
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

56751..58541
DNA (1791bp) protein (597aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
His Kinase A (Phospho-acceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./GAF domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ET43_9BACT
His Kinase A (phospho-acceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./GAF domain
SCNpilot_cont_750_bf_scaffold_41_55
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

58723..59181
DNA (459bp) protein (153aa)
Putative OmpR family two-component system response regulator n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N525_ANATU
putative OmpR family two-component system response regulator
Response regulator {ECO:0000313|EMBL:AIE86855.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_cont_750_bf_scaffold_41_56
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

59330..63037
DNA (3708bp) protein (1236aa)
Adenylate and Guanylate cyclase catalytic domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FD15_9DELT
adenylate/guanylate cyclase
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
SCNpilot_cont_750_bf_scaffold_41_57
unknown

Not on your lists

63133..63351
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_41_58
unknown

Not on your lists

63582..64136
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_41_59
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64153..65043)
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold protein n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K4U1_CYAP8
Alpha/beta hydrolase {ECO:0000313|EMBL:KFN39886.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
alpha/beta hydrolase
SCNpilot_cont_750_bf_scaffold_41_60
unknown

Not on your lists

comp(65150..65332)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 31-60 of 357 in total

View Taxonomy