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SCNpilot_cont_750_bf_scaffold_49

Search features with annotation key words

Displaying items 61-90 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_49_61
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82549..82857)
DNA (309bp) protein (103aa)
Alkylhydroperoxidase AhpD core n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH94_MOOTA
alkylhydroperoxidase AhpD core
Alkylhydroperoxidase AhpD core {ECO:0000313|EMBL:ABC20195.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
SCNpilot_cont_750_bf_scaffold_49_62
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(82887..83810)
DNA (924bp) protein (308aa)
ABC-type sugar transport system, permease component n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F7H2_9THEM
sugar ABC transporter permease
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AFK07875.1}; Flags: Precursor;; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
SCNpilot_cont_750_bf_scaffold_49_63
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83823..84728)
DNA (906bp) protein (302aa)
ABC transporter, permease protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KZT0_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEJ50722.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
sugar ABC transporter permease
SCNpilot_cont_750_bf_scaffold_49_64
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(84741..86330)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI000311991E
glycerol-3-phosphate ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
Tax=Caldatribacterium californiense
SCNpilot_cont_750_bf_scaffold_49_65
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86565..87293
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=2 Tax=Shewanella RepID=A1RFG5_SHESW
regulatory protein GntR
Tax=BJP_IG2069_Desfulfarculales_53_13
SCNpilot_cont_750_bf_scaffold_49_66
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

87315..87971
DNA (657bp) protein (219aa)
putative transferase protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378890
demethylmenaquinone methyltransferase-like protein
Tax=RBG_16_Chloroflexi_68_14_curated
SCNpilot_cont_750_bf_scaffold_49_67
S_Thermodesulfobacterium_commune_37_35, Thermodesulfbacterales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

88015..88989
DNA (975bp) protein (325aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
3-phosphoglycerate dehydrogenase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B77F86
Tax=S_Thermodesulfobacterium_commune_37_35
SCNpilot_cont_750_bf_scaffold_49_68
Planomicrobium glaciei, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

89018..89656
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI0003716A3C
Uncharacterized protein {ECO:0000313|EMBL:ETP67093.1}; TaxID=1273538 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium glaciei CHR43.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_49_69
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89731..90903
DNA (1173bp) protein (391aa)
xlnD; 3-hydroxybenzoate 6-hydroxylase XlnD (EC:1.14.13.24) rbh
3-hydroxybenzoate 6-hydroxylase XlnD n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XN91_9RALS rbh
3-hydroxybenzoate 6-hydroxylase XlnD {ECO:0000313|EMBL:EON20784.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
SCNpilot_cont_750_bf_scaffold_49_70
unknown

Not on your lists

comp(91119..91391)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_49_71
unknown

Not on your lists

comp(91448..91645)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_49_72
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92015..92887)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FADBC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL72904.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
SCNpilot_cont_750_bf_scaffold_49_73
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92884..93849)
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY81_CLOB8 rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABR35311.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
SCNpilot_cont_750_bf_scaffold_49_74
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

94029..94787
DNA (759bp) protein (253aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEU35262.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEU35262.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NUA6_GRAMM rbh
3-oxoacyl-(acyl-carrier-protein) reductase rbh
SCNpilot_cont_750_bf_scaffold_49_75
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

94889..95614
DNA (726bp) protein (242aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2Y6_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH82891.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
short-chain dehydrogenase
SCNpilot_cont_750_bf_scaffold_49_76
unknown

Not on your lists

comp(96012..96191)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_49_77
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96192..96404)
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_cont_750_bf_scaffold_49_78
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(96661..97596)
DNA (936bp) protein (312aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMJ6_9CHLR rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFH86996.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
alcohol dehydrogenase zinc-binding domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_49_79
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97753..98322
DNA (570bp) protein (190aa)
Regulatory protein TetR n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C5F0_STRBB
TetR family transcriptional regulator {ECO:0000313|EMBL:KJK57078.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
regulatory protein TetR
SCNpilot_cont_750_bf_scaffold_49_80
unknown

Not on your lists

98433..98804
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_49_81
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(98907..101084)
DNA (2178bp) protein (726aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
PAS domain S-box n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TNS7_9CYAN
PAS domain-containing protein
SCNpilot_cont_750_bf_scaffold_49_82
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

102036..103931
DNA (1896bp) protein (632aa)
Secreted protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6K0_9CHLR rbh
Secreted protein {ECO:0000313|EMBL:EFH80611.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
secreted protein rbh
SCNpilot_cont_750_bf_scaffold_49_83
unknown

Not on your lists

104486..106150
DNA (1665bp) protein (555aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_49_84
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106370..107284
DNA (915bp) protein (305aa)
peroxidase n=1 Tax=Frankia sp. BCU110501 RepID=UPI000368CDD2 rbh
Dyp-type peroxidase family protein; K07223 putative iron-dependent peroxidase rbh
Dyp-type peroxidase family {ECO:0000313|EMBL:ABW14796.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_750_bf_scaffold_49_85
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

107601..108578
DNA (978bp) protein (326aa)
Heroin esterase n=9 Tax=Bacillus cereus RepID=B5V5M2_BACCE rbh
probable lipase/esterase rbh
Heroin esterase {ECO:0000313|EMBL:ACJ80906.1}; TaxID=405534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus (strain AH187).;"
SCNpilot_cont_750_bf_scaffold_49_86
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108686..109582)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N0Z3_9ACTO
AraC family transcriptional regulator; K02854 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB32636.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_750_bf_scaffold_49_87
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

109722..110498
DNA (777bp) protein (259aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHN3_THET1 rbh
phytanoyl-CoA dioxygenase rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ACZ43254.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_750_bf_scaffold_49_88
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110652..112382)
DNA (1731bp) protein (577aa)
Probable regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98IE9_RHILO
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:AID31862.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
regulatory protein
SCNpilot_cont_750_bf_scaffold_49_89
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

112598..113416
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036BE406 rbh
Phosphatidylethanolamine methyltransferase {ECO:0000313|EMBL:GAN31982.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
putative methyltransferase
SCNpilot_cont_750_bf_scaffold_49_90
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

113559..114131
DNA (573bp) protein (191aa)
Tax=RBG_16_Chloroflexi_57_8_curated
Displaying items 61-90 of 187 in total

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