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SCNpilot_cont_750_bf_scaffold_49_31

Organism: SCNPILOT_CONT_750_BF_Chloroflexi_54_27

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(44738..45640)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBY0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 295.0
  • Bit_score: 269
  • Evalue 4.40e-69
RNA polymerase sigma70 {ECO:0000313|EMBL:ESX64234.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 295.0
  • Bit_score: 269
  • Evalue 6.20e-69
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 284.0
  • Bit_score: 265
  • Evalue 2.00e-68

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGAACCCGGTTCATCCGCTTCTGGCGCATATACCAGGGCCGAGTTTGAGAAAGTGGTTGAGGAGACCCGGCCCCAACTTCACCGCTACGCCGCCCGCATGCTCGGTTCTGTCCTGGATGGAGAAGACGTGGTCCAGGAAGCTTTAGCCAAAGCTTTTAATTCCCTGTCTTCTTTGAGTTCCAATTCAAACCTGCGGGGGTGGCTCTTTCGGATTGTTCACAACAAGGCTATTGATTTTCTCCGCCAGGCGGGTTACCAGAGTATGGAACGCCTGGACGAACATGCCTTGCTTGCCGAACCGGATGTGCCGTTGGAGGAAAAAGAACTCGTAACCGTAGCTCTGTCGGTGTTTCTCAAGCTTGCCCCCAAACAGCGCAGTTGTGTCATTCTCAAAGATGTCCTGGGCTATTCTCTCGCCGAAATGTCAGAATTGCTCAATGCAACTGTCCCGGAGATAAAGGCTGCCCTCCACCGGGGCCGGACTCGCCTGCGTGAACTTGCGGCTCACCTGGAAGAAAATGGTCCCATCTCCATTCCGGATGAACAGGAGCGCGCCCGGTTAAACCGCTATATAGAGCTTTTCAATGCCCAGGACTTTGAAGCGGTGCAGGCCATGTTGACCGAGGATGTCCGGTTGGAATTAGTCAACCGGGTTAAAAAGCAGGGGATTTCCGAGCTCAGCCAGGATTATTTTACAAATTACACCAGGCTGCACGACTGGCGTTGCGCGCCCGGTTACGTCGAGAACCACCTTGCCATCCTGGTTTTCCAGCCTTATGTGGATTCGTCTCAGCCGGATTACTTTATCCTGCTATCCTGGCGGGAAGACAAGGTCGAACTCATCCGTGATTATCGCTACGCTCGGTACGTGATGCAAGAAGCTGAAATTGGCAAAATCTAA
PROTEIN sequence
Length: 301
MEPGSSASGAYTRAEFEKVVEETRPQLHRYAARMLGSVLDGEDVVQEALAKAFNSLSSLSSNSNLRGWLFRIVHNKAIDFLRQAGYQSMERLDEHALLAEPDVPLEEKELVTVALSVFLKLAPKQRSCVILKDVLGYSLAEMSELLNATVPEIKAALHRGRTRLRELAAHLEENGPISIPDEQERARLNRYIELFNAQDFEAVQAMLTEDVRLELVNRVKKQGISELSQDYFTNYTRLHDWRCAPGYVENHLAILVFQPYVDSSQPDYFILLSWREDKVELIRDYRYARYVMQEAEIGKI*