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SCNpilot_cont_750_bf_scaffold_589_22

Organism: SCNPILOT_CONT_750_BF_Rhizobiales_64_62

partial RP 30 / 55 MC: 1 BSCG 31 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(19707..21731)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F0C24 similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 675.0
  • Bit_score: 1161
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 677.0
  • Bit_score: 1159
  • Evalue 0.0
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 678.0
  • Bit_score: 1147
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2025
ATGGCGACAAAGGAAAAGGAAGAGGTCGAGACGGAGCGCGAGGCGACGACGGATGGCCCCCTGCTCGACCTTTCCGACGATGCGGTAAAGAAGATGATCAAGGCCGCCAAGAAGCGCGGCTATGTGACCATGGACGAGCTGAATTCGGTGCTGCCCTCCGAAGAGGTGACCTCCGAGCAGATCGAGGACACGATGGCGATGCTTTCCGACATGGGCATCAACGTCGTGGAGGACGACGAGGCCGCCGAGGAGCCGGAGGCGGAGCCTTCCGACGGCGACGAGGAAGCCAAGGAGATCGCCGAGCAGAACGGCACTGCGCTGGCCGCCGCGCCGGCGAAGAAGGAGCCGACCGACCGTACCGACGACCCGGTGCGCATGTATCTGCGCGAGATGGGCTCGGTCGAACTTTTGTCGCGCGAGGGCGAGATCGCTATCGCCAAGCGCATCGAGGCCGGCCGCGAGACCATGATCGCGGGCCTGTGCGAGAGCCCGCTGACCTTCCAGGCCATCATCATCTGGCGCGACGAACTGAACGAAGCCAAGATCCTGCTCCGCGAGATCATCGATCTCGAAGCGACCTATGCCGGCCCCGAGGCCAAGCAGGCGCCGATCGTCGTGCGCCCCGAGGAGGGCAACGGCAAGCAGGAAGAGGAGCCGCAGAACGTCCGCCGCCTGACCCGCGAAGACGACGACATCACCAATGTCGGCGGCGAGAGCCGTCCGGAAGAGGAGGACGAGGAGGAGGACGAGGCCAATCTGTCGCTCGCCGCGATGGAAGCGGAACTGCGCCCGCAGGTGATGGAGACGCTGGACGTCATCGCCGACACCTACAAGCGCCTGCGCAAGCTACAGGACCAGCAGGTCGAGAACCGCCTTGCCGCCGCCGGCACGCTGTCGCCCAGCCAGGAGCGCCGCTACAAGGAGCTGAAGGAACAGCTCATCAAGGCGGTGAAGTCGCTGTCGCTCAACAATGCGCGCATCGAGGCGCTGGTCGAGCAGCTCTACGACATTAACAAGCGGCTCGTGCAGAACGAGGGCAGGCTGCTCCGGCTCGCCGAGAGCTACGGCGTGCGCCGCGACAATTTCCTCGAGATCTACCAGGGCTCGGAGCTCGATCCGAACTGGATGAAATCGGTCTCCAACCTTTCGGCGCGCGGCTGGAAGGAGTTCACCAAGGCCGAGAAGGAGAAGATCCGCGAGATCCGCATGGAAATCCAGAACCTCGCCACCGAGACCGGCATCTCGATTGCGGAGTTCCGCAAGATCGTCAACCAGGTGCAGAAGGGCGAGCGCGAAGCGGCCATCGCCAAGAAGGAGATGGTCGAGGCGAACCTGCGGCTGGTGATCTCGATCGCCAAGAAATACACGAACCGCGGCCTGCAATTCCTTGATCTCATTCAGGAAGGCAATATCGGCCTGATGAAGGCGGTGGACAAGTTCGAGTATCGCCGTGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATTAGGCAGGCGATCACCCGCTCGATCGCCGACCAGGCCCGCACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGATCGTGCGCACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAACCGACGCCGGAGGAACTGGCCGAGAAGCTCGCCATGCCGCTGGAGAAGGTGCGCAAGGTCCTGAAGATCGCCAAGGAGCCGATCAGCCTCGAGACGCCGGTGGGCGACGAGGAGGACAGCCATCTCGGCGATTTCATCGAGGACAAGGGCGCGGTGCTGCCGATCGACGCCGCGATCCAGGCGAACCTGCGCGAGACCACCACCCGCGTGCTCGCCTCGCTCACGCCGCGCGAGGAGCGCGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACGCTGGAGGAGGTCGGCCAGCAGTTCTCGGTGACGCGCGAGCGCATCCGCCAGATCGAGGCAAAGGCGCTGAGGAAGCTCAAGCATCCGAGCCGGTCGAGAAAGCTCAGGAGCTTTCTGGACAGCTAG
PROTEIN sequence
Length: 675
MATKEKEEVETEREATTDGPLLDLSDDAVKKMIKAAKKRGYVTMDELNSVLPSEEVTSEQIEDTMAMLSDMGINVVEDDEAAEEPEAEPSDGDEEAKEIAEQNGTALAAAPAKKEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQAIIIWRDELNEAKILLREIIDLEATYAGPEAKQAPIVVRPEEGNGKQEEEPQNVRRLTREDDDITNVGGESRPEEEDEEEDEANLSLAAMEAELRPQVMETLDVIADTYKRLRKLQDQQVENRLAAAGTLSPSQERRYKELKEQLIKAVKSLSLNNARIEALVEQLYDINKRLVQNEGRLLRLAESYGVRRDNFLEIYQGSELDPNWMKSVSNLSARGWKEFTKAEKEKIREIRMEIQNLATETGISIAEFRKIVNQVQKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKGAVLPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS*