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SCNpilot_cont_750_bf_scaffold_40941_1

Organism: SCNPILOT_CONT_750_BF_Microbacterium_70_132

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 4 ASCG 12 / 38
Location: 2..1003

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH32_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 353.0
  • Bit_score: 423
  • Evalue 2.00e-115
  • rbh
Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEP74206.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 329.0
  • Bit_score: 494
  • Evalue 1.30e-136
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 353.0
  • Bit_score: 423
  • Evalue 6.40e-116
  • rbh

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
AGAGAAACGGTAGTCACAATGAAGTGGAATACGAAGGCTCTGGCGGTCGTCGCTGTGGGCGCGTCCGCGATGTTCGCCTTGTCGGCTTGTTCGTCGGGATCGGGCGGATCGTCCGCGTCGGGCGGAACGGGACCGAAGATCGCGTTCGTGCAGGGCGTGGCCGGTGACGAGTTCTACATCTCGATGCAGTGCGGCATCCAGTCCGCCGCGAAAGCCGCCGGCGCGACGGTCACCACCCAGGGACCGGAGAAGTTCGACCCCACCCTGCAGAAGCCGATCGTCGACGCGGTCGTGGCCTCCAAGCCCGACGCGCTGCTGATCGCCCCGACCGACGTGACCGCGATGCAGGCCCCCATCGCCGCGGCCGCCGCCGCCGGCATCAAGGTCGTCCTCGTCGACACCACCCTGCAGGACCCGTCCATGGCCGTGTCCCAGATCTCCTCCGACAACAAGGGCGGCGGCGCGGCCGCGTTCGACGCGATCAAGGCCGCCCACCCCGACGGCGGCAAGGTCCTCGTCGTGTCCATCGACCCCGGCATCTCCACCAGCGACGACCGCGCCGCCGGCTTCGAAGACGCCGTCGCGAAGGACTCGAAGTTCACCTCCCTCGGCATCCAGTACTCCCACAACGAGCCCGCCACCGCCGCGGAGATCGTCACCGCAGCCCTCCAGAAGGACCCCGACATCGTCGGCATCTTCGCCGCGAACCTGTTCGCCGCCGAAGGCACCGCGACCGGCATCAAGCAGGCCGGCAAGACCGGCGTGACCGTCGTCGGCTTCGACGCCGGACCCGCCCAGGTCAAGGCCCTCAAGGACGGCACCGTCCAAGCCCTCGTCGCCCAGGAACCCGGCACCATCGGAAAGGACGCCGTCGCCCAGGCCCTCGCCGCCCTCAACGGCCAGACCGTGCAAGCCAAGATCCAGACCGGCTTCACCGTCATCACCAAGGACAACGTCGACACCACCGCCAAAGACGCCGTCTACCAGTCCTCCTGCGGCTAA
PROTEIN sequence
Length: 334
RETVVTMKWNTKALAVVAVGASAMFALSACSSGSGGSSASGGTGPKIAFVQGVAGDEFYISMQCGIQSAAKAAGATVTTQGPEKFDPTLQKPIVDAVVASKPDALLIAPTDVTAMQAPIAAAAAAGIKVVLVDTTLQDPSMAVSQISSDNKGGGAAAFDAIKAAHPDGGKVLVVSIDPGISTSDDRAAGFEDAVAKDSKFTSLGIQYSHNEPATAAEIVTAALQKDPDIVGIFAANLFAAEGTATGIKQAGKTGVTVVGFDAGPAQVKALKDGTVQALVAQEPGTIGKDAVAQALAALNGQTVQAKIQTGFTVITKDNVDTTAKDAVYQSSCG*