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SCNpilot_expt_1000_bf_scaffold_5834_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(6457..7179)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATPase; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 239.0
  • Bit_score: 220
  • Evalue 7.70e-55
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035E3FFA similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 232.0
  • Bit_score: 228
  • Evalue 5.30e-57
Putative ABC transporter ATP-binding protein in rpoN region {ECO:0000313|EMBL:CCF18302.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 213.0
  • Bit_score: 223
  • Evalue 3.10e-55

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
GTGAGCGGCGCGGCAAGCGCCGCGCCGGCCGGCGCCGAGGGCGGCTTCGGCGCCGTCGGGCTCGGCAAGCAGTACGATGGGGTCACGGTGGCCCGCAACATCCACATCGCGGTGCGGCCGGGAGAGGCCGTCGGCCTGTTCGGCCGGTCGGGATCGGGCAAGTCGACCATCTTCGGCATGATGGCCGGCACGCTCGGGCCGGATGCCGGCCGCGTCGTCCTCGACGGCGCCGACATAGGCGGGCTCGACGTCGACAAGCGGGCGCGGCTGGGCGTCGGCTACATCCCGCAGGCGCCCGAGCTGTTCTCCGAGCTGACCGTGGCCGACAACCTCCGGATCGCCATCGAGGAGCGGGTGCGCGGCCGGACCGCCCGCCGCGCGGCGATCGACGCGCTGATCGAGGCCTACGGCCTCGGCCGCTGGCGCGACCGGCGGCTGTCGGCGCTATCGGGCGGCGAGCGCCGGCAGTGCGAGATCGCCTTCGTGATGTCGACGCGGCCGCGCTTCATGCTGCTCGACGAGCCCTTCACCGGGCTCGACCCGATCGTCTCGGAGACGGTCAGGCGCCGCATCGCGCGCATGACGCAGGCCGGCATCGGCGTGCTGGTAACCGACCACAAGGTGCGCGAGGCGCTGACGCTGGTCGACCGCGCCTACATCATCGACGACGGCGAGATCATCGCCGAGGGCCGGCCCGCCGGTTCGCCACGACGGCGGCGGTGA
PROTEIN sequence
Length: 241
VSGAASAAPAGAEGGFGAVGLGKQYDGVTVARNIHIAVRPGEAVGLFGRSGSGKSTIFGMMAGTLGPDAGRVVLDGADIGGLDVDKRARLGVGYIPQAPELFSELTVADNLRIAIEERVRGRTARRAAIDALIEAYGLGRWRDRRLSALSGGERRQCEIAFVMSTRPRFMLLDEPFTGLDPIVSETVRRRIARMTQAGIGVLVTDHKVREALTLVDRAYIIDDGEIIAEGRPAGSPRRRR*