ggKbase home page

SCNpilot_expt_1000_bf_scaffold_19370_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 3..1307

Top 3 Functional Annotations

Value Algorithm Source
Putative spermidine/putrescine ABC transporter, substrate-binding protein substrate-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUV8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 432.0
  • Bit_score: 864
  • Evalue 5.80e-248
  • rbh
Putative spermidine/putrescine ABC transporter, substrate-binding protein substrate-binding protein {ECO:0000313|EMBL:ENN85465.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 432.0
  • Bit_score: 864
  • Evalue 8.20e-248
putative polyamine ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 432.0
  • Bit_score: 856
  • Evalue 5.00e-246
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ACTGACATGACGACTGAAACGAAGACTACCAAGACGACAAAAGGCATTTCCCGCCGCTCGCTGCTGAAGACTGGCGCTGCCGCTCTCGGCGCAATGGCAGGCTCCGGGGTCATCACTGGCTTCCCGACCATCTGGGCTAAATCCAACATCACATTGCGCCAGTTCGGCACCGGCGTTTCGAACATCAATGCGATCGCGGAGAAGTGCAAGGCCGACCTCGGCATCACGCTCGAGATGACGGCGATGGACTCCGACGCCGCCGCCCAGCGTGCGGTCACGCAGCCGAACAGCTACGACATCGCCGACATCGAATACTGGATCGCCAAGAAGGTCTTTCCCGCCGGCGTCATGCAGCCGATGGACGTCAAGAAGCTGAAATACTACGACAAGATCGTGCCGCTCTTCATCAACGGTAAGCTGAAGCCCGACAGCGTCATTGCACAGGGCACCGCGCCGCACACGGTGGGCTTCGTCGAGGGGCAAGACTCCCGCAAGTTCGCCAAGGAGCCGACGCAGTGGATGACGATGGTTCCGACCATCTATAACGCCGACACGCTCGGCATTCGTCCTGATCTCACCGGCCGTCCGATCAACAGCTGGGCCGATATTCTCGATCCGGCCTTCAAGGGCAAGACCGCGATCCTTAACATCCCGTCGATCGGCATCATGGATGCCGCGATGATCATGGAAGCCGCGGGCAAGATCAAGTATGCCGATAAGGGCAACATGACGAAGGCGGAGATCGACAAAACGATCGAGTTCCTGATCAAGACCAAGGGCGAGGGCCAGTTCCGCGCCTTCTGGAAGTCGTTCGATGAAAGCGTCAACCTGATGGCGTCGGGCGAGGTGGTCATCCAGTCCATGTGGTCGCCGGCGGTTGCCGCCGTCCGCTCCAAGGGGATTGCCTGCACCTTCCAGCCGCTCAAGGAAGGTTACCGCGCCTGGGGCGGCGGCCTCGGCCTTGCCTCGCATCTGAAGGGCGCCGAGCTAGACGCTGCCTACGAATATATCAACTGGTACACGTCTGGCTGGGTCGGCGGCTACCTCAACCGCCAAGGTTATTATTCCGCCTGCATGGACACCGCCAAGAACTTCATGTCGGCCGACGAATGGGGTTACTGGATCGAGGGCAAGCCGGCGCAGGGCGACATCCTCTCTCCGGAAGGCAAGGTCATGGAGAAGGCCGGTGCTGTTCGCGATGGCGGTTCCTTCGAGGCTCGCATGGGCGCCGTCGCCTGCTGGAATTCTGTCATGGATGAGGACCGCTACATGGTCCGCCGCTGGAACGAATTCATCGCCGCCTGA
PROTEIN sequence
Length: 435
TDMTTETKTTKTTKGISRRSLLKTGAAALGAMAGSGVITGFPTIWAKSNITLRQFGTGVSNINAIAEKCKADLGITLEMTAMDSDAAAQRAVTQPNSYDIADIEYWIAKKVFPAGVMQPMDVKKLKYYDKIVPLFINGKLKPDSVIAQGTAPHTVGFVEGQDSRKFAKEPTQWMTMVPTIYNADTLGIRPDLTGRPINSWADILDPAFKGKTAILNIPSIGIMDAAMIMEAAGKIKYADKGNMTKAEIDKTIEFLIKTKGEGQFRAFWKSFDESVNLMASGEVVIQSMWSPAVAAVRSKGIACTFQPLKEGYRAWGGGLGLASHLKGAELDAAYEYINWYTSGWVGGYLNRQGYYSACMDTAKNFMSADEWGYWIEGKPAQGDILSPEGKVMEKAGAVRDGGSFEARMGAVACWNSVMDEDRYMVRRWNEFIAA*