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SCNpilot_expt_1000_bf_scaffold_19588_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 1555..2133

Top 3 Functional Annotations

Value Algorithm Source
Resistance nodulation cell division (RND) drug efflux pump, MFP component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIH4_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 193.0
  • Bit_score: 325
  • Evalue 4.30e-86
resistance nodulation cell division (RND) drug efflux pump, MFP component similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 193.0
  • Bit_score: 325
  • Evalue 1.40e-86
Resistance nodulation cell division (RND) drug efflux pump, MFP component {ECO:0000313|EMBL:AGB70516.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 193.0
  • Bit_score: 325
  • Evalue 6.10e-86

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAAAAATTCTGGCTTCCCCTCGGCCTTCTCGTCGTCGCAGCCCTTGCCGTATGGGGCTATCGCGACCGTATTCCTTTCCTCTCCGCAATTGTCGATCAGGCCTCCGCTGAAACCAAAGACAATACCAAGACGCCTGCGAAAGGCGGGCAGAAACATCAGGCCCTGACCTCGGTCGTCAAGACGGCCGCGGTGGAGAAGAGACTTCTGCCGAACGACATTACAGCGACCGGCTCGGCCGTGGCGCAAAATGCCACGACGATCGCGGCGCAGGAATCGGGCATCATCACATCGATCGAGGCACAAGACGGCGCGATGGTGAAGGCCGGCGACCTGATCGCCAGGCTGGATGCGCGGACCGCGCAGGCCGCTGTCGACAAGGACCAGGCGACCATCGCCAAGGATCAGGCGACCCTCGTGGCCGCGGAATCAGCCCTGACCCGGGCCAAGAGCCTGCTTGCAAACGCGGGAACGCAACAAACCGTCGATCAGGCAGTGGCAGCCCGCGATACCGCGGCGGCCGACGTCAATGCCGACAAGGCCCAGCTGGCATCCGATCAGGTGCTGCTGGAGAACACC
PROTEIN sequence
Length: 193
MKKFWLPLGLLVVAALAVWGYRDRIPFLSAIVDQASAETKDNTKTPAKGGQKHQALTSVVKTAAVEKRLLPNDITATGSAVAQNATTIAAQESGIITSIEAQDGAMVKAGDLIARLDARTAQAAVDKDQATIAKDQATLVAAESALTRAKSLLANAGTQQTVDQAVAARDTAAADVNADKAQLASDQVLLENT