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SCNpilot_expt_1000_bf_scaffold_20728_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 1427..2035

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GPJ3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 203.0
  • Bit_score: 292
  • Evalue 2.50e-76
AraC family transcriptional regulator {ECO:0000313|EMBL:KJF73725.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 202.0
  • Bit_score: 307
  • Evalue 1.10e-80
AraC-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 203.0
  • Bit_score: 291
  • Evalue 1.80e-76

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGGATCCCCTGAGTGACATCATTGCCCTGCTGCGTCCGAACGCAGCCGTCTCGAAGCCCATCTCCGGCAAGGGGGCATGGGGCGTTCGATATGCATCCTACGATTCACCGGGCTTCACCACCGTCCTCTCCGGCGAGGCTTGGCTGACCTTCGATAAGGAAGAGCCGCTACGTCTGGCGCCCGGCGATTTCCTGTTGCTGCCGACAACCCCGGCCTTCTCGCTGAGCAGCGAGCCGGGCGTGCGGTGCGATCCTGTCGAACCGCGTGCCGAGGCTGTTCGCCACGGTGAAAAGGAAGGCGACCCCGATTTCATGGCGCTTGGCGGCAGTTTCGCGTTCGAGCGTGTGAATGCGCCGCTTCTTCTCTCACTCCTGCCTGGACGCATCCATGTTCCCGCGTCGGAGGGCAAAGCCACGCGTTTTGGTCGTCTAATCGAACTGCTCACCGAGGAGTGCGCCGCCGATTACCCGGGCAAGGATCTTATCCTGCAGCGGATGCTGGAAGCGTTGCTCATCGAGGCGCTGCGCTGGAGGAGCGTCGGAAAGGATGGAGCGGTTGCGGGGCTGTTGAATGGCATGCGCGACCCGGCGCTCTCGCGCGCCCTCCAT
PROTEIN sequence
Length: 203
VDPLSDIIALLRPNAAVSKPISGKGAWGVRYASYDSPGFTTVLSGEAWLTFDKEEPLRLAPGDFLLLPTTPAFSLSSEPGVRCDPVEPRAEAVRHGEKEGDPDFMALGGSFAFERVNAPLLLSLLPGRIHVPASEGKATRFGRLIELLTEECAADYPGKDLILQRMLEALLIEALRWRSVGKDGAVAGLLNGMRDPALSRALH