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SCNpilot_expt_1000_bf_scaffold_23401_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 2999..3562

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X055_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 161.0
  • Bit_score: 95
  • Evalue 7.10e-17
Uncharacterized protein {ECO:0000313|EMBL:KIZ47634.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 158.0
  • Bit_score: 112
  • Evalue 7.90e-22
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 161.0
  • Bit_score: 94
  • Evalue 2.90e-17

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGATATTCAGTCTGCGCAAATCGATGTCGCCATCATGGCGGGCGAGCCGATGCACCCTGGACTGGCGACCCTGAAACTATGGTCCGAGACAATTTCGCTGCTGTTGCCGAAGTCGCATACATTGTCTGCAGCGGACTCGATCTCGTGGTCGGTGCTGCGTGATGAGCGGTTTATCCTCTCCGCTGGAGGCACTGGTTCTGAGATGCGGGACCGTCTGCTTTGCCGCTTCTCTGAGCTGGGATGTCTCCCACGGCTTGATATTCAGGAGATCTGCCAGGAGGACGTTTTGCAGTTGGTCGCGTCTAACTACGGCGTTTCATTAGGACGGACGTCCGTGGCGGACAATAGCAATGCCGGGATTGCGGTTCGCGCCCTGGATACCGGCGATACTTTGCTGACCAGCGCGGTCTGGCTAAAGCGAAACTCCAATCCTGCCTTAAAGAAATTCTTGGCGATCGCGCGCACCAAGTTGGCTCTGACGGTGGCCTGCTCAACGGCCGGGTGTCCAATCGGGGAAGCCCGTGCTGCGAGAAGCGTGAACGCTAAATTATCGAAGGGCTGA
PROTEIN sequence
Length: 188
MDIQSAQIDVAIMAGEPMHPGLATLKLWSETISLLLPKSHTLSAADSISWSVLRDERFILSAGGTGSEMRDRLLCRFSELGCLPRLDIQEICQEDVLQLVASNYGVSLGRTSVADNSNAGIAVRALDTGDTLLTSAVWLKRNSNPALKKFLAIARTKLALTVACSTAGCPIGEARAARSVNAKLSKG*