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SCNpilot_expt_1000_bf_scaffold_26146_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 1635..2279

Top 3 Functional Annotations

Value Algorithm Source
Prion protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037980C3 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 212.0
  • Bit_score: 350
  • Evalue 1.40e-93
  • rbh
Glycine betaine/L-proline transport system permease protein ProW {ECO:0000313|EMBL:EYR83931.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 215.0
  • Bit_score: 349
  • Evalue 4.40e-93
proW; putative glycine betaine/L-proline transport system permease protein; K02001 glycine betaine/proline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 214.0
  • Bit_score: 347
  • Evalue 2.90e-93
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGGCCTGTGGGGCGCGATGATGGAGACACTGTCGCTCGTGATTGCCTCCACGCTCATGGCAATGATCCTCGGCCTGCCGCTCGGCATCGCCATGGCAAGCCGCAATGCGATCGCCGCCGCAGTTCGCCCGATCCTCGACCTGATGCAGACGATGCCTGCCTTCGTCTACCTGATCCCGGCCGCCATGTTCTTCGGTCTCGGCGCCGTGCCGGGCGCGATCGCGACGGTGATCTTCTCGATGCCGCCAGTGGTGCGCCTGACCAATCTCGGCATTCGCCAGGTCCATCCCGAATTCGTCGAGGCCGGCAATGCCTTCGGCTGCACGTCGGCGCAGCTGCTGTTCAAGGTGCAGCTGCCGAACGCCATGCCGTCAATCATGGCCGGCATCAATCAGACGATCATGCTGTCGCTCTCCATGGTCGTCATCGCCTCGATGATCGGCGCGGGTGGCATTGGCAACACGGTCCTGACGGGCATCCAGCGTCTCGATGTCGGCACCGGCTTCGAAGGAGGACTGGCAGTCGTCATCCTTGCCGTCATTCTCGACCGTATTACCCAGAGCCTTGGCTCCCGCCGGCTCACCCTGCTGCAATCGCTCTTCCGAAGGAGTGAAAGCGAGCCCCTGGTGACGGCTACGGCCTGA
PROTEIN sequence
Length: 215
MGLWGAMMETLSLVIASTLMAMILGLPLGIAMASRNAIAAAVRPILDLMQTMPAFVYLIPAAMFFGLGAVPGAIATVIFSMPPVVRLTNLGIRQVHPEFVEAGNAFGCTSAQLLFKVQLPNAMPSIMAGINQTIMLSLSMVVIASMIGAGGIGNTVLTGIQRLDVGTGFEGGLAVVILAVILDRITQSLGSRRLTLLQSLFRRSESEPLVTATA*