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SCNpilot_expt_1000_bf_scaffold_26028_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(3..749)

Top 3 Functional Annotations

Value Algorithm Source
GGDEF domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMJ9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 249.0
  • Bit_score: 448
  • Evalue 5.70e-123
GGDEF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 249.0
  • Bit_score: 448
  • Evalue 1.80e-123
GGDEF domain-containing protein {ECO:0000313|EMBL:AGB72477.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 249.0
  • Bit_score: 448
  • Evalue 8.00e-123

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
TTGGGAGCAGCTTTCAAGTCACTGCGTCAGAGTGCACACATCGGTCGTCATTCCATCGTGACGGCCGTCTTGGTTTCCTTCGCTCTTGTCGTTGCCGTGGTGACTCTGATGGTGCTCACCGCGATCGGCCGCGTTGCCGATTATTCCAACAAGCTGGACGACGAGCGCTCCTGGGAGACGACCGTCGGCGCGTTGAAGACGTTTCAAGGGCAGCTGGAAGCGACGTTGCACGACCATTCCGCGCGCAACGATGCGGCGCGGCACGTCTACGGAACCGACAATCAGGGATGGATCGTCGGCAACTATGGCGACATCTCCTCCAACGGTGCGCTGTTCGACACCGCAGTCATCGTCGATGACGACAACAAGCCTGTCATCGCCTATCACGACGGCCAACCGATGACAGAGAATATCGAGGATGTGCTCGGGACCGCCGTCTGGGCGCTCGTCGATCAGGCGCGCACGACGCGCATCACGGGTGTGCCGGAAGCCTCGGGCTATATCATGACGCGGGACGGCATCGCCGCCGCCGGCGCCGCGACGATCCGCGAGAGATCGGGCCGCATTCCGGTGCCCGAGGGTCATCGGCGCTATCTGATCCTTGTGCGCTATCTCGATGCCGCCCGCATCAAGATGCTCTCCAACACCTATGTCATCAGTGGCCTGACGCTGGTGCCGCCGGATACGGTTGCGCTGCATGCGGTCTCCATCGTCGATCCGCTCGGCAAGTCGCTTGGGCGGCTGATG
PROTEIN sequence
Length: 249
LGAAFKSLRQSAHIGRHSIVTAVLVSFALVVAVVTLMVLTAIGRVADYSNKLDDERSWETTVGALKTFQGQLEATLHDHSARNDAARHVYGTDNQGWIVGNYGDISSNGALFDTAVIVDDDNKPVIAYHDGQPMTENIEDVLGTAVWALVDQARTTRITGVPEASGYIMTRDGIAAAGAATIRERSGRIPVPEGHRRYLILVRYLDAARIKMLSNTYVISGLTLVPPDTVALHAVSIVDPLGKSLGRLM