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SCNpilot_expt_1000_bf_scaffold_31161_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 3..527

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN32_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 174.0
  • Bit_score: 319
  • Evalue 2.80e-84
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 174.0
  • Bit_score: 319
  • Evalue 8.90e-85
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AGB72106.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 174.0
  • Bit_score: 319
  • Evalue 4.00e-84

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
GTTGACCGGCTCGTGGCGCATGGGCATCGCCGCATTGCCGTGAGCACCCCTTCCAGCGACATCAATCTCGGCTTCATCTTCGTTGAGGGCTATCGCCGCGCGCTGGAGCGGCACGGCATCGCCTATGACCCCGCGCTGGTCATCCGCGCCAAGTCGAGCGAACAGGGCGGCTATCAGGTTGCCGATGAGCTGCTGCGCCTCGAAGATCAACCGACAGCCGTGATCCTGATCTATGAATTGATGGCGATCGGTTTTTATCGGCGCGTCATGGAATCCGGGATCATTCCCGGACGCGACATTGCCGTCGTCAGTTTCCGCGAGGCGCCACGCGCCAAATTCCTGCAGCCGGCGCTGACCTGCTTTCGCACGTCGCTCCACGACCTTGGCGTCGAACTGGCCGAAATTCTGCTCTCCAGCATGCCGGCCTACAGCGAGGAATACCCGAGGACGTCGCGCCAGAGCGTGTGGCCGCTCGAACTCATTCCCGGTGAAAGCGACGCTTTCCAGCTGACGACGGCAAAATAG
PROTEIN sequence
Length: 175
VDRLVAHGHRRIAVSTPSSDINLGFIFVEGYRRALERHGIAYDPALVIRAKSSEQGGYQVADELLRLEDQPTAVILIYELMAIGFYRRVMESGIIPGRDIAVVSFREAPRAKFLQPALTCFRTSLHDLGVELAEILLSSMPAYSEEYPRTSRQSVWPLELIPGESDAFQLTTAK*