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SCNpilot_expt_1000_bf_scaffold_37480_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(3..779)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Rhizobium sp. AP16 RepID=J2WYV7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 221.0
  • Bit_score: 369
  • Evalue 2.10e-99
  • rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEA07737.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 258.0
  • Bit_score: 414
  • Evalue 1.30e-112
solute-binding periplasmic protein of iron/siderophore ABC transporter similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 265.0
  • Bit_score: 225
  • Evalue 1.50e-56

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGATAACGAGACGCCGGCTCTTTACCTCCGTCGCTGCCACGGCACTTCTTTCATGGGTGACGCCAACACTGGCGGATAGATCGTTCAAGGTGATCGATCTGGCGGGGCGCGAGCTCAAGTTCGCTGCTCCGCCGAAAAGGATCATTCTACTCGAGGCGCGTGATCTTTTGACGATGTCCCTCCTGCATCCCGATCCGGCGTCGCTGGTCGTCGGTTGGGCTGCTGTCGACAGGATCGACAGCGAACAGCTTCAGACACGTCTTCTGAACGGCCATTCTGTCAGCGTCGTTGGCAAGCAGACCCCCGATACCGTGTCCCTCGAAGGACTGATCAGTCTTTCGCCCGATCTCGTGGTGACGACTGCCTTCATGACGCCGGATGGCGACAGCAATCCGATGGTCGAGCGGTTGATGCAACTGGGGATCCAGGTCGCCTACAGCGACGCCGCGAGCAATAGCGCCAACAGTGGGGCGGCGAGCGATCCCGCGGCGGAGCTCGAGGCATCCATGCGCATGTGGGGGGCGCTTCTCAACACTACAGCGAAGGCGGAGAGATTCATCGCCTTCTTCGACGGTGAATTGACAAGGATTGTGTCCCTCGTCAAAGACAAGCCGCCGGTCACGACCTATCTGGAAGTCCAGTCCACCGTGGACGACTGCTGCTGGGCTGCTGGACGAAAGGTCTGGGGAGATCTCCTGGCGCTTGCGGGCGGTCAACCTTTGCCTGGCGTGACGGCGCCATGGTTTCAGCAATTGTCTCTCGAATATGTGCTTGCG
PROTEIN sequence
Length: 259
MITRRRLFTSVAATALLSWVTPTLADRSFKVIDLAGRELKFAAPPKRIILLEARDLLTMSLLHPDPASLVVGWAAVDRIDSEQLQTRLLNGHSVSVVGKQTPDTVSLEGLISLSPDLVVTTAFMTPDGDSNPMVERLMQLGIQVAYSDAASNSANSGAASDPAAELEASMRMWGALLNTTAKAERFIAFFDGELTRIVSLVKDKPPVTTYLEVQSTVDDCCWAAGRKVWGDLLALAGGQPLPGVTAPWFQQLSLEYVLA