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SCNpilot_expt_1000_bf_scaffold_2587_13

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 11107..11655

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E2CA52 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 174.0
  • Bit_score: 289
  • Evalue 1.90e-75
DNA repair protein RadC {ECO:0000313|EMBL:AJP71051.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 174.0
  • Bit_score: 313
  • Evalue 2.30e-82
DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 175.0
  • Bit_score: 264
  • Evalue 2.10e-68

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTCCGAACGTTCCGACAATAGCGGCCACCGCGCGCGCCTGCGCCGCCGCCTGTTCGAGGGCGGGCCGGACGCGCTGCTCGATCACGAACTCGTCGAATACCTCCTCGCACTGGCGATTCCCCGGCAGGATACCAAGCCGCTGGCCAGGGCGCTGCTCCACGAATTCGGCGGCATCGCCGGGCTTCTCACTGCGGATGCCGAGGCGCTGGCGCGCGTGAAGGGCATGGGCGAGACCAGCGTCGCCGCCTTGAAGACGGCCCATGCCGCGGCGCTCCGCCTGCTGCGCGCCGAAGTCGCCGAGCGCCCGGTACTCGCCAATTGGCAGGCATTGCTCGATTATCTGCGCGCCGACATGGCCCATCATGCGATCGAGCGCTTCCGCGTCCTCCATCTCAATTCCAAGAACATGCTGATCCGCGACGAGCTGATGGGCGAAGGCACGATCGACGAGGCCGCCGTCTATGTCCGCGAAGTGATCCGGCGCGCGATCGAGCTCGGCTCCGCGGCGCTGATCCTTGTCCACAACCACCCCACTTGGTCATTTTGA
PROTEIN sequence
Length: 183
MSERSDNSGHRARLRRRLFEGGPDALLDHELVEYLLALAIPRQDTKPLARALLHEFGGIAGLLTADAEALARVKGMGETSVAALKTAHAAALRLLRAEVAERPVLANWQALLDYLRADMAHHAIERFRVLHLNSKNMLIRDELMGEGTIDEAAVYVREVIRRAIELGSAALILVHNHPTWSF*