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SCNpilot_expt_1000_bf_scaffold_2587_18

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(16500..18548)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraD n=1 Tax=Sphingomonas melonis RepID=UPI0003761EB3 similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 682.0
  • Bit_score: 1315
  • Evalue 0.0
  • rbh
Conjugal transfer protein TraD {ECO:0000313|EMBL:AHE53740.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 686.0
  • Bit_score: 1217
  • Evalue 0.0
VirD4/TraD-like protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 698.0
  • Bit_score: 997
  • Evalue 1.70e-288
  • rbh

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2049
GTGAGCATCTTCCGCCATGACACGCTTGGCTCCTGGACGCGTGGCGGCCAGGCCATCGTCCACAATGTCCGCATGACCACCCAGGTCTTCTACCAGACCTTCCTCGCGGGGCTGGTGATCTGGATCGGCGGCATCATCTGGTACGCACTCGAAAAGTCGTCCGAATACGAACGCTTCGTGATGCTCAAGATCACCCAGGCCTATTTCATGGGTGATACGCTGCCCGGTAACGCGACACCGATCCTGTTCAAGACACCGGCCGGCAAACAATATTGGACCACTCCCAAGAGCCTCGTCAGTTCGGGCGTCGCCCATAAGACGCTCGCGGCCTTCGAAACCTATCTCCTCCACGGAGCTTTGCTTGCCGGTCTGTTCGCCCTCGCAATGCTGTTCTGGGCATGGTTCTACTTCACCCGGACGGGGAGGGGGCTCGGCTCCAATCAGTTTCTGCGCGGGGCGCGGTTCGGCACCGTCAAGCAGGTTCGCCGCGCGCTCTGGCGTCAGGCCAAGGGCAGCTTCCAGATTGGCGGCGTCAATGTGCCCGACGCTTTCGAACCGGAGCACATCCTGATCTGCGGTGCTCCTGGAACGGGAAAGACCAACATCATCGTCAAGATGCTCGACGGGATCCGCAAGCGGAAGCGCCGGGCGATCGTCTACGACACCGCCGGCACCTTCGTGGAGAAATTCTACCGGCCCGGCATCGACGCCCTGCTCAACCCGCTCGATGCGCGCGCAGACTCATGGTCGCCCTGGGTCGATGTGCCGCGCGACTATCATTACGACCAGATCGCGGAGTCCACGATCCCCGACAAGACGGGCGATCCTTTCTGGGCGAAGGCTGCGCGGGGCACGCTGGTCGCCGTGCTCCGGAAATTGGCGAAGCAGGAACGTACCCTCGTCTCGATCCTGCTCGACACGCTGCTCCGCTCCAAGCTGAAGGATCTCGCCGCCTTCGCCGCAGGCACCGATGCGGCGGCGTTCATATCGACCGAGGGTGAGCGCACCAGTGCCGGCATCCAGGCGGAGCTCGCCTCCGTGATGCGCAGCTTCTCCTATCTCGACGACACCGCCGACGGGTTCTCGATCCGCGACTGGGTCGCCAATGAGAAGGACGACAGCTGGCTGTTCATCACTGTAAAGGCTGACCAGCTTCCCTCACTCCGACCCCTGATCACGGTGTGGCTCGACATCGCGATCAGCGCGATCATGAGCATGACGCCCGATCGCAACCGGCGCCTCTATTGTGTCATCGATGAGCTGCCGACGCTCCAGAAGCTGCCCTCGCTCGGCGACTTCCTCGCCCGTGCCCGCAAATATGGCGGCTGCGGCATCCTCGGCTTCCAGAGCTACCCCCAGCTCGAGGCGACCTACGGCATTCAGGATGCCGCGGCGATCACCGGCTATTGCTCGACCTGGGTGGCTCTCCGCGCCAACGACACCCCCACCGCCAAGCATGTCAGCGAGAATCTCGGGCAGGTCGAGCAGGTCGAAGCCAATGAGGGCATGTCCTACGGCGTGAACGACATGCGCGATGGTGTGAACCTCTCGCGCATGCAGGTCACCCGGCCGCTGGTCATGCACACCGAGGTCACCAACCTGCCGAACCTCATGGGCTACCTGAGGTTCGGTCGCAGTCTGCCGGTGGTCCGCTTCGAGGACAGCTACAACAAGGTGGCGTCGGTCGCCGAGGCGTTCGAGGAGCGGACACCCACTCCCATCAGGCTGGCTGGGCCGGTCGTCGAATTCTCCCCGGCCCCGCTGGTCTCATCCTCGCCGACCAGGCCCAAATCTTCCCCTCCGAAGCGGCGGCGGGCTGGCTCCGAAGAGCAACCTGCCGAGCTTCCGCTCCCGCAACCGCATGAACCGCCGACCGCGCCCGTGGACGCCTCGAGCGAGAGTCCTATGCCACCGCCCGCCGATCCGCCTGGAGGGGGAGAACAGCAGGCTCCACGCCCTCGCCTCGAATTGTTCGGCAAGCCTGCAGGCTTCCGCCTTGAGCAGCACGGTCGTCGTGACGGCGCCCGCAACAAAGCGAGGCCGGCATGA
PROTEIN sequence
Length: 683
VSIFRHDTLGSWTRGGQAIVHNVRMTTQVFYQTFLAGLVIWIGGIIWYALEKSSEYERFVMLKITQAYFMGDTLPGNATPILFKTPAGKQYWTTPKSLVSSGVAHKTLAAFETYLLHGALLAGLFALAMLFWAWFYFTRTGRGLGSNQFLRGARFGTVKQVRRALWRQAKGSFQIGGVNVPDAFEPEHILICGAPGTGKTNIIVKMLDGIRKRKRRAIVYDTAGTFVEKFYRPGIDALLNPLDARADSWSPWVDVPRDYHYDQIAESTIPDKTGDPFWAKAARGTLVAVLRKLAKQERTLVSILLDTLLRSKLKDLAAFAAGTDAAAFISTEGERTSAGIQAELASVMRSFSYLDDTADGFSIRDWVANEKDDSWLFITVKADQLPSLRPLITVWLDIAISAIMSMTPDRNRRLYCVIDELPTLQKLPSLGDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCSTWVALRANDTPTAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVMHTEVTNLPNLMGYLRFGRSLPVVRFEDSYNKVASVAEAFEERTPTPIRLAGPVVEFSPAPLVSSSPTRPKSSPPKRRRAGSEEQPAELPLPQPHEPPTAPVDASSESPMPPPADPPGGGEQQAPRPRLELFGKPAGFRLEQHGRRDGARNKARPA*