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SCNpilot_expt_1000_bf_scaffold_5653_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 410..748

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylglucosamine 4,6-dehydratase (EC:4.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 106.0
  • Bit_score: 153
  • Evalue 4.20e-35
polysaccharide biosynthesis protein CapD n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EB50 similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 112.0
  • Bit_score: 188
  • Evalue 3.70e-45
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EAQ29446.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. NAP1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 106.0
  • Bit_score: 159
  • Evalue 2.60e-36

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Taxonomy

Erythrobacter sp. NAP1 → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
TTGCTGGTGCCGAAGATTCCGTCCTATCGTATCGGCGACGTGGCGACCGCGATCGCTCCCGATGCTCGTCAGGAAATGATCGGCATCCGTCCGGGCGAGAAGATCCACGAGGAGATGATCACTTCCTCGGACAGCTTCAACACCGTGGACCTCGGTGACTATTACGCGATCCTGCCGGTGTCGGCGAACTACTCCATCGAGGAATATTGCCAGCGCCGCGGCGGTAAGCCGGTGGAGCCGGGCTTTGCGTATAGCAGCGGCACCAATCCCGATTTCCTCTCGGTCGAACAAATCCGCGAGCTGATCGACGAACATGTTGTCGGCAAGACGATCGACTGA
PROTEIN sequence
Length: 113
LLVPKIPSYRIGDVATAIAPDARQEMIGIRPGEKIHEEMITSSDSFNTVDLGDYYAILPVSANYSIEEYCQRRGGKPVEPGFAYSSGTNPDFLSVEQIRELIDEHVVGKTID*