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SCNpilot_expt_1000_bf_scaffold_26737_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 732..1622

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630282 similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 294.0
  • Bit_score: 505
  • Evalue 4.70e-140
  • rbh
Transcriptional regulatory protein {ECO:0000313|EMBL:CCW18818.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 295.0
  • Bit_score: 481
  • Evalue 7.80e-133
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 380
  • Evalue 4.20e-103

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGTTCGAGCTCAGCCAGCTCCGCTGCTTCGTCGCCGCGGCCGAGGAACTCCATTTCGGCCGAGCCGCGCAGCGCCTGAACATGACCCAGTCGCCGCTCAGCCGGCAGATCCAGCTGCTCGAGCGCATTCTGGGCGTCATGCTGCTCGAGCGCACCAGCCGCCAGGTGAGCCTGACGCCCGCTGGCCAGGTCTTCCTGATCGAGGCGCGGCGCATCGTGCGGCTCGCCGAAAGCGCCTCGCTGTCGGCGCGGCGAGTCGCGCAGGGCGATGCCGGCAAGGTCGCGATCGGCTTCACTGCCGTCTCCGGCTATGGACTGGTCCCGCATATCGTCGCCAATGCGCGCGCGAGCCTGCCCAACATCGATCTCGATCTCCACGAGATGGTGAGCGGCGACCAGGTCGATGCGCTGCTCACCGGCCTGATCGATATCGGTTTCGTCCGCCCGCCGGTCGACAGGCACGAGTTCGACACGCTGTGCGTGCTGCGCGAGCCGCTGGTGGTGGCGCTGCCGCCCGGCGATCCGCGCCAGTCCCGTCCCGCCTTCGAACTGGTCGATTTCGATAACGAGCCGCTGATCATGTATGCGCGGCAGGGCGCGGGCTATTTCCACGACATGCTGGTGCGGCTTTTCGACGATGCCGGCGTCTCGCCGCTCCATGTGCAGCACGTCACGCAGATCCATTCGATGCTCGGCCTCGTCCATGCCGGCCTCGCCGCCGCGCTGGTGCCGCAATCGGCATCGGGCCTGCACCTGATGGACGTGCAGTTCCGCGCGCTGCGCACCGATCCGGAGAACCCCGTCGAACTCCACATGGCGTGGCGCCGCGACAACGCCAATCCGGCGCTCGAACCGATGCGGCAGCTCTGCGCGCAGACGGCGGGCGCGTGA
PROTEIN sequence
Length: 297
MFELSQLRCFVAAAEELHFGRAAQRLNMTQSPLSRQIQLLERILGVMLLERTSRQVSLTPAGQVFLIEARRIVRLAESASLSARRVAQGDAGKVAIGFTAVSGYGLVPHIVANARASLPNIDLDLHEMVSGDQVDALLTGLIDIGFVRPPVDRHEFDTLCVLREPLVVALPPGDPRQSRPAFELVDFDNEPLIMYARQGAGYFHDMLVRLFDDAGVSPLHVQHVTQIHSMLGLVHAGLAAALVPQSASGLHLMDVQFRALRTDPENPVELHMAWRRDNANPALEPMRQLCAQTAGA*