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SCNpilot_expt_1000_bf_scaffold_5719_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: comp(195..1607)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYV1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 463.0
  • Bit_score: 573
  • Evalue 2.20e-160
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 463.0
  • Bit_score: 573
  • Evalue 7.00e-161
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 463.0
  • Bit_score: 573
  • Evalue 3.10e-160

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGCGAAGATCTCCTTTGTCTGTCAGGCCTGCGGCGCGGTTCACGCCAAATGGTCCGGCCGTTGCGATGCCTGCGGCGGATGGAACACGATTGTGGAGGAAGCCGCCGCTATCCCTGCCGGTGCCAGTGCCAAGCCGCGCGCGCGGGGGCGGCCGTTCGCGCTGGAAGACCTGAAGACGGAAGAGGGGGCACCCGCCCGCCGGGCCAGCGGTATCGGCGAATTCGACCGGGTCTGCGGTGGCGGTTTGGTGCCGGGCTCCGCCCTTCTGATCGGCGGCGATCCGGGGGTGGGCAAATCCACCCTGATCCTGCAGGCGCTGGCGGCCTTCGCACGCGGTGGCGGTTCGGCCGTCTATATTTCCGGTGAAGAGGCGATGGCGCAGGTGCGTCTGCGTGCCGCCCGGATGGGGCTGTCCGAAGCGCCGGTCCAACTGGGCGCGGCCACCTGTGTCGAAGATATTCTGGCCACGCTCGAAAGCGCACCGGCGCCCGGTGTGCTCGCCATCGATTCCATCCAGACGATCTGGACTTCCGCGCTCGACGCCGCACCCGGCACCATTGCGCAGGTGCGCACCGCCTCCTTCGATCTGGTGCGCTACGCCAAGGCATCGGGGGCGGCGCTGCTGCTGGTCGGGCATGTGACCAAGGATGGGCAGATTGCCGGTCCCCGCGCGGTCGAGCATCTGGTCGATGCCGTGCTCTATTTCGAGGGCGAGCGCGGCCACCATTTTCGCGTGCTGCGTGCGGTGAAGAACCGCTTCGGGCCGACCGACGAAATCGGCGTGTTCGAGATGACCGGGGGTGGATTGGCCGAGGTCGGCAATCCCTCGGCGCTGTTTCTGGGCGATCGTACCGCACGCGCGCCGGGGGCGGCGGTGTTTGCGGGGCTGGAGGGTACACGCCCGTTGCTGATGGAAATTCAGGCGCTGGTGGCACCGGCCGGTTATGGCTCCCCACGCCGGGCGGTGGTGGGCTGGGACAGCGGGCGGCTCGCCATGATTCTGGCCGTACTGGATGCCCGCGCCGGCCTTGGAATCAGTGCCCACGACGTCTATCTGAATGTTGCCGGCGGACTGAAAATCGCCGAACCGGCGGCGGATCTGGCGGCTGCGGCCGCGCTGATCTCCTCTTTTTCGGGCGAAACCTTGCCGCCGGACTGTGTGTTTTTTGGCGAACTGAGCCTTTCCGGTGATGTGCGGCCCGCGCCGCAGACGGAGTTGCGTCTGAAGGAAGCGGCAAAATTGGGTTTCAAACGCGCTTATGTCCCGGCCGGGGTCAAAACCGGCACCGGGCTGGAGCTGCACCCCGTGGAATCGGTGGCGGCCTTGGCCACGCTTGCGGGCGGGCAGGGCGGCCGCCGGAAAACATCGGGCAAAAAATCGCTACCCGAACACCCCGGAGAGGCATGGTAA
PROTEIN sequence
Length: 471
MAKISFVCQACGAVHAKWSGRCDACGGWNTIVEEAAAIPAGASAKPRARGRPFALEDLKTEEGAPARRASGIGEFDRVCGGGLVPGSALLIGGDPGVGKSTLILQALAAFARGGGSAVYISGEEAMAQVRLRAARMGLSEAPVQLGAATCVEDILATLESAPAPGVLAIDSIQTIWTSALDAAPGTIAQVRTASFDLVRYAKASGAALLLVGHVTKDGQIAGPRAVEHLVDAVLYFEGERGHHFRVLRAVKNRFGPTDEIGVFEMTGGGLAEVGNPSALFLGDRTARAPGAAVFAGLEGTRPLLMEIQALVAPAGYGSPRRAVVGWDSGRLAMILAVLDARAGLGISAHDVYLNVAGGLKIAEPAADLAAAAALISSFSGETLPPDCVFFGELSLSGDVRPAPQTELRLKEAAKLGFKRAYVPAGVKTGTGLELHPVESVAALATLAGGQGGRRKTSGKKSLPEHPGEAW*