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SCNpilot_expt_1000_bf_scaffold_5194_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(9223..9735)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 171.0
  • Bit_score: 277
  • Evalue 2.20e-72
Ribonuclease D {ECO:0000255|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000255|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000255|HAMAP-Rule:MF_01899};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 171.0
  • Bit_score: 277
  • Evalue 9.90e-72
Ribonuclease D n=2 Tax=Methylocella silvestris RepID=RND_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 171.0
  • Bit_score: 277
  • Evalue 7.00e-72

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
GAGCGCGAAGCGCAGACGCGCGACGTGCCGCGCTCCCGCGTTCTGAAAGATGACGCCATGGTCGAAGTGGCTTTGGCGGCGCCGCGCACGGCGGAGGCACTTGGCAATCTGCGGGCTTTCCCGCGTGGCATGGAACGCTCGCGCGGCGGCGCCGAACTACTGGCCGCCATCGAGCGCGGCCTGGCGCGCGACCCCAAGACCTTGCCGAAGATCGAACGCGAACGGCGCAGCGGCGGCAATGGCGCGACCGTCGAACTGTTGAAAGTGCTGCTGCGGCAGGTGAGCGAGCGCCATGGCGTGGCGCCCAAGATGATCGCCACGGTGGATGATCTCGAAGCCATATCAGCCGACGACAACGCGCCGGTTGCCGCCCTCACCGGCTGGCGACGGGAGCTTTTCGGCGTCCGCGCGCTCGAACTCAAGCACGGGAAGCTCGCGCTGACCATCGAACGCGGCCGGGTGATCACCCTGGCTTGGCAGGATGCCCCGGCCGACGAGCCGGCGGTTGCCTAA
PROTEIN sequence
Length: 171
EREAQTRDVPRSRVLKDDAMVEVALAAPRTAEALGNLRAFPRGMERSRGGAELLAAIERGLARDPKTLPKIERERRSGGNGATVELLKVLLRQVSERHGVAPKMIATVDDLEAISADDNAPVAALTGWRRELFGVRALELKHGKLALTIERGRVITLAWQDAPADEPAVA*