ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9152_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(8008..8991)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IC88_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 313.0
  • Bit_score: 421
  • Evalue 5.80e-115
  • rbh
integrase family protein; K03733 integrase/recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 313.0
  • Bit_score: 421
  • Evalue 1.80e-115
  • rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 313.0
  • Bit_score: 421
  • Evalue 8.10e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGACCGGCGCCCCAGACACCCCGACCCCTTTCTCCAGCTTCGTCCTGCCGGGCGCCGATGCCGCCTTTGCCGCGGAAGTGCGCCGCTGGCTGACGGCGCTCGCCAGCGAACGACGCCTGTCCGACCACACGCTGACCGCTTACGGCCGCGATCTCAAACAATTCGTCACCTTCCTGCAGGGCCATTTCGGCGAGCCGGTGTCGCTCACCCTGTTCGCCGCCCTGGCTCCGGCGGATCTGAGAAGCTTCCTGGCCAGCCGCCGCGCGACCGGCGTCGAAAGCCGCTCCCTGCTGCGCGCGCTGGCCGGCCTGCGCTCCTTCGCCCGTTTCCTGGAAAAGCACGGTAAGGGCTCGGCCTCGGTCCTGGCCCTGGTACAGACGCCGAAAATCGCCCGCTCCCTGCCCAAGCCCGTATCGCCGGCCGCTGCCCGCGACATGACCCAGACCGAGAGCCGAGCCGGCGACAGCAGGCCGCCCTGGATCCTCGCCCGTGACGCCGCCGTGCTGGCCCTGCTCTACGGATCGGGCCTGCGCATTTCCGAAGCCCTGGCCATCCGCCGCCGCGAGGCGCCCGTTGGCGCCACCGACCAGCTCACGGTCATCGGCAAAGGCCGCAAGACCCGCATGACGCCGGTGATCCAGCCGGTCCGCCGCGCGATCGAAGCCTATCTTGAACTGTGCCCTTATCCCCTGCCGCCGGACGGACCTCTGTTCGTCGGCGCCAAGGGCGGTCCGCTGTCGCCGCGCATCATCCAGCTTTGCGTCGAGCAATTGCGCGGCGCGCTGGGCCTGCCCGAGACGGCGACGCCGCACGCGCTGCGCCATTCCTTCGCCACACACTTGCTCTCACGCGGCGGCGATCTCCGATCGATCCAGGAATTGCTCGGCCACGCCTCACTGTCGACGACGCAAATCTACACCGCCGTCGACACCACCCGCCTGATGGACGCGTGGCGCAATGCGCACCCGCGCGCAAGCTCATAG
PROTEIN sequence
Length: 328
MTGAPDTPTPFSSFVLPGADAAFAAEVRRWLTALASERRLSDHTLTAYGRDLKQFVTFLQGHFGEPVSLTLFAALAPADLRSFLASRRATGVESRSLLRALAGLRSFARFLEKHGKGSASVLALVQTPKIARSLPKPVSPAAARDMTQTESRAGDSRPPWILARDAAVLALLYGSGLRISEALAIRRREAPVGATDQLTVIGKGRKTRMTPVIQPVRRAIEAYLELCPYPLPPDGPLFVGAKGGPLSPRIIQLCVEQLRGALGLPETATPHALRHSFATHLLSRGGDLRSIQELLGHASLSTTQIYTAVDTTRLMDAWRNAHPRASS*