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SCNpilot_expt_1000_bf_scaffold_12135_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(3802..4185)

Top 3 Functional Annotations

Value Algorithm Source
photosystem reaction center subunit H n=1 Tax=Rhizobium leguminosarum RepID=UPI0003771E7F similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 81.0
  • Bit_score: 71
  • Evalue 9.80e-10
PRC-barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 112.0
  • Bit_score: 73
  • Evalue 6.20e-11
Photosystem reaction center subunit H {ECO:0000313|EMBL:KEA05409.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 82.0
  • Bit_score: 73
  • Evalue 2.80e-10

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGTTGAAACAAGTCACGCTGAAGCACATCAGCGTAGCGGCGTTCCTTGTCGCCGTCAGTGGTGGTTACGGTATCGCACAATCGACGCCGCCGGCCGCCCCCGCGCAGGCACCTACCGCGCAAGCACCGGCCACGAGCGCCCCTGCCTCGAACTACGTGACGACCCATTCGCCAAGCCAGTCTTTGGCGTCGGGTATTGTGAACAAGAATGTTTATGATCCCAAGGATGAGAAGATCGGCGAGGTTAACGATCTTCTGCTCGATCGCTCCACCGGTGCCGTCGCGGCTGCTGTGATCGGCGTGGGCGGCTTTCTGGGCATCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTGCTGAACACGACGAAGGATGA
PROTEIN sequence
Length: 128
MLKQVTLKHISVAAFLVAVSGGYGIAQSTPPAAPAQAPTAQAPATSAPASNYVTTHSPSQSLASGIVNKNVYDPKDEKIGEVNDLLLDRSTGAVAAAVIGVGGFLGIGXXXXXXXXXXXXGAEHDEG*