ggKbase home page

SCNpilot_expt_1000_bf_scaffold_40194_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 2..1162

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 591
  • Evalue 1.60e-166
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CCJ08612.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CCJ08612.1};; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 591
  • Evalue 7.00e-166
Ribonuclease R n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QA82_METSZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 591
  • Evalue 5.00e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
GAAACCTTGAAAGAGGCGGAAGCGGCGCAGCCGGCAACGCTGGCTGGCCGCGAGGATTGGCGCAAACTGCCGCTCGTCACCATCGACCCCGCCGACGCCAAGGATCATGACGACGCCGTGCATGCGGTGGCTGACGATGATCCCGACAACAGCGGCGGCTTCATCCTCACCGTCGCCATCGCCGATGTCGCCGCTTATGTGCGGCCGGGTTCATCGCTCGATCGCGAAGCCTTGGAACGCGGCAATTCGGTCTACTTCCCCGATCGTGTCGTGCCGATGCTGCCGGAGCGGATCTCCAACGATCTATGCTCGCTGCGTCCGAAGGAAGACCGCCCCGCTCTAGCGGTGCGCATGATCATCGCCAAAGACGGCCGCAAGCTGCGTCATACCTTTCATCGCGTGCTCATGCGCTCGGCCGCCAAGCTCGCTTATCCGCAAGCCCAGGCCGCCATCGACGGCACGCCCGATGACACCACCGCGCCTTTGCTCGAAAAGGTGCTCAAGCCGCTTTGGGCGGCTTGGCGCGCGCTCGACGAAGCGCGTGCCAAGCGCAGCCCGCTCGATCTCAACCTGCCCGAGCGCAAACTGCTGCTGACGGCTGACGGCCGTATCGATCGCGTCATCATTCCGCCGCGGCTCGAAGCGCATCGGCTGATCGAGGAATATATGATCCTCGCCAATGTCGCGGCCGCCGAGACGTTGGAAGCGCAAGGACAACAGCTCGTCTATCGCACCCATGACGAACCCTCCGTCGAGAAGATGCATGGCCTGGGCGAATTCCTCGCCACCATCGGCGTCAAACTCGCCAAGGGCCAGGTGCTGCGGCCGCAACAGTTCAACGGCATTTTGGAGCGGGTGAAAGGCAGCGAACATGAAAACGCTGTCAACGAAGTGGTGTTGCGCACGCAAGCGCAGGCCGAATATTCATCGGAAAACTACGGCCATTTCGGTCTCAACCTGCGCCGCTACGCGCATTTCACCTCGCCCATCCGTCGCTATGCCGATCTGATCGTCCATCGCGCTTTGATCCGCGCCTTGAAGCTTGGACCCGATGGCCTGCCAAATATGGAACCCGACGAGCTCGCCGAGATCGCTGCACGCATCTCGGCGGCTGAGCGTCGCGCTATGGCGGCCGAGCGTGAAACGACCGAGCGGCTTATC
PROTEIN sequence
Length: 387
ETLKEAEAAQPATLAGREDWRKLPLVTIDPADAKDHDDAVHAVADDDPDNSGGFILTVAIADVAAYVRPGSSLDREALERGNSVYFPDRVVPMLPERISNDLCSLRPKEDRPALAVRMIIAKDGRKLRHTFHRVLMRSAAKLAYPQAQAAIDGTPDDTTAPLLEKVLKPLWAAWRALDEARAKRSPLDLNLPERKLLLTADGRIDRVIIPPRLEAHRLIEEYMILANVAAAETLEAQGQQLVYRTHDEPSVEKMHGLGEFLATIGVKLAKGQVLRPQQFNGILERVKGSEHENAVNEVVLRTQAQAEYSSENYGHFGLNLRRYAHFTSPIRRYADLIVHRALIRALKLGPDGLPNMEPDELAEIAARISAAERRAMAAERETTERLI