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SCNPILOT_EXPT_750_P_Chlamydiae_37_5_partial

SCNPILOT_EXPT_1000_BF_Chlamydiales_38_4
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Chlamydiales  →  Chlamydiia  →  Chlamydiae  →  Bacteria

Displaying items 101-150 of 578 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_6794
Order: Chlamydiales (50%)
6 6488 bp 34.23 4.55 58.08
SCNpilot_expt_1000_bf_scaffold_8716
Species: Neochlamydia sp. TUME1 (66.67%)
6 6885 bp 37.14 3.74 70.37
SCNpilot_expt_1000_bf_scaffold_7516
Species: Neochlamydia sp. TUME1 (66.67%)
6 5197 bp 38.87 3.85 86.47
SCNpilot_expt_1000_bf_scaffold_10768 6 4065 bp 36.41 3.38 74.91
SCNpilot_expt_1000_bf_scaffold_7265
Genus: Neochlamydia (50%)
6 7266 bp 36.25 4.13 65.73
SCNpilot_expt_1000_bf_scaffold_16555
Species: Neochlamydia sp. EPS4 (60%)
5 3545 bp 39.10 3.67 59.41
SCNpilot_expt_1000_bf_scaffold_5357
Order: Chlamydiales (100%)
5 5863 bp 40.75 3.88 92.97
SCNpilot_expt_1000_bf_scaffold_6557
Order: Chlamydiales (60%)
5 5067 bp 39.14 3.65 83.07
SCNpilot_expt_1000_bf_scaffold_8737 5 4090 bp 36.28 4.03 85.23
SCNpilot_expt_1000_bf_scaffold_16572
Species: Neochlamydia sp. TUME1 (80%)
5 2881 bp 36.31 4.25 40.82
SCNpilot_expt_1000_bf_scaffold_10283
Order: Chlamydiales (80%)
5 3614 bp 39.65 4.43 83.92
SCNpilot_expt_1000_bf_scaffold_15247 5 2633 bp 35.06 3.32 81.35
SCNpilot_expt_1000_bf_scaffold_19383
Genus: Neochlamydia (60%)
5 4733 bp 35.26 3.17 53.05
SCNpilot_expt_1000_bf_scaffold_7045
Genus: Neochlamydia (60%)
5 4807 bp 36.01 3.90 79.38
SCNpilot_expt_1000_bf_scaffold_7818
Species: Neochlamydia sp. EPS4 (60%)
5 4458 bp 39.93 4.71 91.18
SCNpilot_expt_1000_bf_scaffold_9379
Species: Neochlamydia sp. TUME1 (60%)
5 3878 bp 39.04 5.29 93.30
SCNpilot_expt_1000_bf_scaffold_29770
Species: Neochlamydia sp. EPS4 (60%)
5 2608 bp 39.26 3.45 83.51
SCNpilot_expt_1000_bf_scaffold_8011
Order: Chlamydiales (60%)
5 5878 bp 37.50 4.25 69.87
SCNpilot_expt_1000_bf_scaffold_17444
Order: Chlamydiales (60%)
5 4175 bp 38.40 2.63 61.29
SCNpilot_expt_1000_bf_scaffold_16357
Species: Neochlamydia sp. EPS4 (60%)
5 2480 bp 39.80 3.63 77.66
SCNpilot_expt_1000_bf_scaffold_9649 5 7869 bp 39.92 4.03 72.78
SCNpilot_expt_1000_bf_scaffold_18697
Genus: Neochlamydia (60%)
5 3399 bp 39.13 3.53 85.70
SCNpilot_expt_1000_bf_scaffold_19420
Species: Neochlamydia sp. EPS4 (60%)
5 4556 bp 34.37 3.18 50.18
SCNpilot_expt_1000_bf_scaffold_13263
Genus: Neochlamydia (80%)
5 4154 bp 40.25 3.61 80.96
SCNpilot_expt_1000_bf_scaffold_13519
Genus: Neochlamydia (60%)
5 2899 bp 36.53 4.23 83.20
SCNpilot_expt_1000_bf_scaffold_16900
Species: Neochlamydia sp. EPS4 (60%)
5 2917 bp 36.68 4.20 88.55
SCNpilot_expt_1000_bf_scaffold_14496
Genus: Neochlamydia (100%)
5 2743 bp 41.27 2.92 96.57
SCNpilot_expt_1000_bf_scaffold_8311
Species: Neochlamydia sp. EPS4 (60%)
5 4239 bp 36.73 4.07 95.19
SCNpilot_expt_1000_bf_scaffold_12467
Genus: Neochlamydia (60%)
5 5115 bp 38.57 3.47 68.09
SCNpilot_expt_1000_bf_scaffold_12724
Species: Parachlamydia acanthamoebae (100%)
5 3475 bp 38.82 3.17 99.54
SCNpilot_expt_1000_bf_scaffold_24554
Order: Chlamydiales (60%)
5 3056 bp 39.10 4.17 78.24
SCNpilot_expt_1000_bf_scaffold_11657 5 4926 bp 34.00 4.16 70.71
SCNpilot_expt_1000_bf_scaffold_8077
Genus: Neochlamydia (80%)
5 4880 bp 34.86 3.59 79.55
SCNpilot_expt_1000_bf_scaffold_10653 5 3955 bp 35.68 4.42 39.44
SCNpilot_expt_1000_bf_scaffold_4127
Genus: Neochlamydia (60%)
5 7032 bp 38.96 3.59 86.95
SCNpilot_expt_1000_bf_scaffold_6946
Genus: Neochlamydia (60%)
5 4851 bp 38.88 4.48 92.08
SCNpilot_expt_1000_bf_scaffold_21488 5 3980 bp 33.72 3.33 82.09
SCNpilot_expt_1000_bf_scaffold_16456
Order: Chlamydiales (80%)
5 2802 bp 38.54 3.84 92.72
SCNpilot_expt_1000_bf_scaffold_9236
Species: Neochlamydia sp. EPS4 (60%)
5 3922 bp 37.46 3.38 75.27
SCNpilot_expt_1000_bf_scaffold_22853
Species: Neochlamydia sp. EPS4 (60%)
5 3291 bp 40.81 3.65 95.99
SCNpilot_expt_1000_bf_scaffold_10167
Species: Parachlamydia acanthamoebae (60%)
5 5035 bp 36.09 3.18 90.57
SCNpilot_expt_1000_bf_scaffold_18801
Genus: Neochlamydia (60%)
5 4399 bp 36.64 4.43 80.88
SCNpilot_expt_1000_bf_scaffold_29625
Species: Neochlamydia sp. EPS4 (60%)
5 4196 bp 37.56 3.69 83.58
SCNpilot_expt_1000_bf_scaffold_20348
Order: Chlamydiales (80%)
5 4266 bp 38.65 4.04 71.45
SCNpilot_expt_1000_bf_scaffold_7453
Species: Parachlamydia acanthamoebae (60%)
5 5135 bp 37.62 3.51 90.15
SCNpilot_expt_1000_bf_scaffold_15406 5 5023 bp 36.53 3.53 82.84
SCNpilot_expt_1000_bf_scaffold_6481
Order: Chlamydiales (60%)
5 5108 bp 40.04 4.45 94.32
SCNpilot_expt_1000_bf_scaffold_5550
Species: Neochlamydia sp. TUME1 (60%)
5 5708 bp 38.24 4.07 95.23
SCNpilot_expt_1000_bf_scaffold_12054
Order: Chlamydiales (60%)
5 4854 bp 38.20 3.61 77.26
SCNpilot_expt_1000_bf_scaffold_13399 5 4871 bp 34.86 3.44 65.35
Displaying items 101-150 of 578 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.