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SCNPILOT_EXPT_750_P_Chlamydiae_37_5_partial

SCNPILOT_EXPT_1000_BF_Chlamydiales_38_4
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Chlamydiales  →  Chlamydiia  →  Chlamydiae  →  Bacteria

Displaying items 451-500 of 578 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_18265
Species: Neochlamydia sp. EPS4 (50%)
2 3703 bp 36.67 3.24 53.88
SCNpilot_expt_1000_bf_scaffold_17734
Species: Neochlamydia sp. EPS4 (66.67%)
3 2323 bp 39.30 3.23 95.44
SCNpilot_expt_1000_bf_scaffold_14753
Genus: Neochlamydia (66.67%)
3 2709 bp 38.13 3.23 77.30
SCNpilot_expt_1000_bf_scaffold_15966
Genus: Neochlamydia (50%)
4 5026 bp 38.94 3.23 65.18
SCNpilot_expt_1000_bf_scaffold_23958
Species: Chlamydia sp. 'Rubis' (50%)
2 2332 bp 37.91 3.22 96.87
SCNpilot_expt_1000_bf_scaffold_37231 3 1247 bp 32.16 3.21 66.16
SCNpilot_expt_1000_bf_scaffold_37090
Species: Bacillus thermoamylovorans (50%)
2 1251 bp 39.49 3.20 92.57
SCNpilot_expt_1000_bf_scaffold_30115
Species: Chlamydia sp. 'Rubis' (50%)
2 1486 bp 38.02 3.20 91.86
SCNpilot_expt_1000_bf_scaffold_24942
Order: Chlamydiales (66.67%)
3 2185 bp 37.44 3.20 74.83
SCNpilot_expt_1000_bf_scaffold_18944
Species: Neochlamydia sp. TUME1 (66.67%)
3 2194 bp 42.71 3.19 100.09
SCNpilot_expt_1000_bf_scaffold_22782
Genus: Neochlamydia (66.67%)
3 1880 bp 35.16 3.19 66.22
SCNpilot_expt_1000_bf_scaffold_25204
Species: Neochlamydia sp. EPS4 (100%)
1 1723 bp 41.79 3.19 99.77
SCNpilot_expt_1000_bf_scaffold_19420
Species: Neochlamydia sp. EPS4 (60%)
5 4556 bp 34.37 3.18 50.18
SCNpilot_expt_1000_bf_scaffold_10167
Species: Parachlamydia acanthamoebae (60%)
5 5035 bp 36.09 3.18 90.57
SCNpilot_expt_1000_bf_scaffold_19383
Genus: Neochlamydia (60%)
5 4733 bp 35.26 3.17 53.05
SCNpilot_expt_1000_bf_scaffold_19654
Species: Neochlamydia sp. EPS4 (71.43%)
7 7338 bp 38.25 3.17 83.24
SCNpilot_expt_1000_bf_scaffold_12724
Species: Parachlamydia acanthamoebae (100%)
5 3475 bp 38.82 3.17 99.54
SCNpilot_expt_1000_bf_scaffold_28053
Species: BJP_IG2158_Anaerolineales_38_74 (50%)
2 1578 bp 34.79 3.17 61.41
SCNpilot_expt_1000_bf_scaffold_14388
Genus: Neochlamydia (66.67%)
3 2762 bp 33.42 3.17 65.60
SCNpilot_expt_1000_bf_scaffold_29645
Order: Chlamydiales (100%)
3 1505 bp 36.08 3.16 88.90
SCNpilot_expt_1000_bf_scaffold_17846
Species: Neochlamydia sp. EPS4 (100%)
2 2768 bp 35.66 3.16 80.09
SCNpilot_expt_1000_bf_scaffold_15465
Class: Chlamydiia (57.14%)
7 4825 bp 34.67 3.16 62.49
SCNpilot_expt_1000_bf_scaffold_23559
Species: Neochlamydia sp. EPS4 (50%)
2 1825 bp 37.86 3.15 88.77
SCNpilot_expt_1000_bf_scaffold_41823
Species: Neochlamydia sp. TUME1 (50%)
2 1116 bp 43.19 3.14 97.85
SCNpilot_expt_1000_bf_scaffold_36250
Species: Candidatus Protochlamydia amoebophila (100%)
1 1275 bp 43.76 3.14 100.00
SCNpilot_expt_1000_bf_scaffold_9304 3 4619 bp 37.22 3.14 79.11
SCNpilot_expt_1000_bf_scaffold_20246
Species: Parachlamydia acanthamoebae (100%)
1 2075 bp 42.17 3.13 99.90
SCNpilot_expt_1000_bf_scaffold_9501
Species: Neochlamydia sp. EPS4 (50%)
6 4314 bp 36.74 3.13 59.94
SCNpilot_expt_1000_bf_scaffold_24487
Order: Chlamydiales (50%)
4 2324 bp 31.15 3.12 43.89
SCNpilot_expt_1000_bf_scaffold_25937
Species: Neochlamydia sp. EPS4 (75%)
4 1683 bp 39.33 3.12 73.62
SCNpilot_expt_1000_bf_scaffold_21473
Species: Neochlamydia sp. TUME1 (50%)
10 5301 bp 39.86 3.11 85.57
SCNpilot_expt_1000_bf_scaffold_14580
Genus: Neochlamydia (66.67%)
3 2732 bp 39.49 3.11 90.70
SCNpilot_expt_1000_bf_scaffold_20148
Species: Parachlamydia acanthamoebae (50%)
4 3217 bp 39.60 3.11 85.14
SCNpilot_expt_1000_bf_scaffold_35430
Species: Neochlamydia sp. TUME1 (66.67%)
3 1298 bp 40.37 3.08 100.54
SCNpilot_expt_1000_bf_scaffold_18587
Species: Simkania negevensis (100%)
3 4063 bp 34.70 3.08 93.77
SCNpilot_expt_1000_bf_scaffold_35257
Species: Neochlamydia sp. EPS4 (50%)
2 1303 bp 40.29 3.07 95.55
SCNpilot_expt_1000_bf_scaffold_53894
Species: Neochlamydia sp. TUME1 (100%)
3 1383 bp 37.60 3.07 99.57
SCNpilot_expt_1000_bf_scaffold_40868
Species: Neochlamydia sp. TUME1 (50%)
2 1144 bp 40.91 3.06 100.18
SCNpilot_expt_1000_bf_scaffold_26897
Species: Neochlamydia sp. EPS4 (50%)
2 1633 bp 37.42 3.06 92.77
SCNpilot_expt_1000_bf_scaffold_30480
Species: Parachlamydia acanthamoebae (100%)
2 1471 bp 42.08 3.06 99.12
SCNpilot_expt_1000_bf_scaffold_39606
Species: Neochlamydia sp. EPS4 (66.67%)
3 1970 bp 37.06 3.05 87.26
SCNpilot_expt_1000_bf_scaffold_37770
Species: Chlamydia sp. 'Rubis' (100%)
2 1231 bp 41.02 3.05 105.04
SCNpilot_expt_1000_bf_scaffold_29774
Genus: Neochlamydia (66.67%)
3 1972 bp 37.78 3.04 93.26
SCNpilot_expt_1000_bf_scaffold_17896
Species: Parachlamydia acanthamoebae (50%)
2 2305 bp 35.66 3.04 88.37
SCNpilot_expt_1000_bf_scaffold_27802
Domain: Bacteria (100%)
3 2319 bp 37.95 3.02 99.22
SCNpilot_expt_1000_bf_scaffold_45900 4 1738 bp 34.70 3.02 67.49
SCNpilot_expt_1000_bf_scaffold_11474
Genus: Neochlamydia (66.67%)
6 4060 bp 36.35 3.02 88.97
SCNpilot_expt_1000_bf_scaffold_29881
Species: Parachlamydia acanthamoebae (50%)
2 1496 bp 35.56 3.01 72.19
SCNpilot_expt_1000_bf_scaffold_40161
Species: Klebsiella michiganensis (50%)
2 1164 bp 36.51 3.01 82.99
SCNpilot_expt_1000_bf_scaffold_29742
Species: Parachlamydia acanthamoebae (50%)
2 1501 bp 32.84 3.00 34.18
Displaying items 451-500 of 578 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.