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SCNPILOT_EXPT_750_P_Chlamydiae_37_5_partial

SCNPILOT_EXPT_1000_BF_Chlamydiales_38_4
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Chlamydiales  →  Chlamydiia  →  Chlamydiae  →  Bacteria

Displaying items 251-300 of 578 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_7154
Order: Chlamydiales (55.56%)
9 8496 bp 37.49 3.88 73.48
SCNpilot_expt_1000_bf_scaffold_12508
Species: Simkania negevensis (50%)
4 3094 bp 36.33 3.88 75.34
SCNpilot_expt_1000_bf_scaffold_5323 6 6770 bp 36.01 3.88 64.30
SCNpilot_expt_1000_bf_scaffold_17700
Species: Neochlamydia sp. TUME1 (66.67%)
3 2326 bp 37.36 3.87 75.06
SCNpilot_expt_1000_bf_scaffold_37918
Species: Neochlamydia sp. TUME1 (50%)
2 1941 bp 37.87 3.86 85.47
SCNpilot_expt_1000_bf_scaffold_10921
Species: Neochlamydia sp. EPS4 (50%)
2 3433 bp 39.41 3.86 96.74
SCNpilot_expt_1000_bf_scaffold_3762
Order: Chlamydiales (70%)
10 7505 bp 35.94 3.86 79.87
SCNpilot_expt_1000_bf_scaffold_11601
Species: Neochlamydia sp. EPS4 (50%)
6 7458 bp 37.54 3.85 58.93
SCNpilot_expt_1000_bf_scaffold_2628
Genus: Neochlamydia (66.67%)
9 10312 bp 36.90 3.85 84.51
SCNpilot_expt_1000_bf_scaffold_29920
Species: Neochlamydia sp. TUME1 (100%)
2 1494 bp 42.84 3.85 96.18
SCNpilot_expt_1000_bf_scaffold_7516
Species: Neochlamydia sp. TUME1 (66.67%)
6 5197 bp 38.87 3.85 86.47
SCNpilot_expt_1000_bf_scaffold_5884 3 5470 bp 35.21 3.84 75.74
SCNpilot_expt_1000_bf_scaffold_44274
Species: Neochlamydia sp. TUME1 (50%)
2 1042 bp 37.62 3.84 78.31
SCNpilot_expt_1000_bf_scaffold_16456
Order: Chlamydiales (80%)
5 2802 bp 38.54 3.84 92.72
SCNpilot_expt_1000_bf_scaffold_7187
Order: Chlamydiales (55.56%)
9 8724 bp 35.95 3.84 92.61
SCNpilot_expt_1000_bf_scaffold_16914
Order: Chlamydiales (50%)
4 2414 bp 37.90 3.83 80.90
SCNpilot_expt_1000_bf_scaffold_6013
Genus: Neochlamydia (55.56%)
9 6069 bp 38.00 3.83 91.40
SCNpilot_expt_1000_bf_scaffold_23139
Species: Parachlamydia acanthamoebae (66.67%)
3 3133 bp 37.25 3.83 100.16
SCNpilot_expt_1000_bf_scaffold_21613
Species: Neochlamydia sp. EPS4 (66.67%)
3 1964 bp 39.61 3.82 89.97
SCNpilot_expt_1000_bf_scaffold_9008
Domain: Bacteria (66.67%)
6 3994 bp 40.59 3.82 96.22
SCNpilot_expt_1000_bf_scaffold_29667
Species: Candidatus Protochlamydia amoebophila (100%)
1 1504 bp 38.10 3.82 99.93
SCNpilot_expt_1000_bf_scaffold_17148
Species: Neochlamydia sp. TUME1 (100%)
3 3019 bp 34.32 3.81 54.75
SCNpilot_expt_1000_bf_scaffold_31165
Species: Neochlamydia sp. TUME1 (50%)
4 1970 bp 41.37 3.81 91.68
SCNpilot_expt_1000_bf_scaffold_20003
Species: Neochlamydia sp. TUME1 (50%)
2 2097 bp 39.68 3.81 91.99
SCNpilot_expt_1000_bf_scaffold_2817
Domain: Bacteria (81.82%)
11 13307 bp 38.06 3.81 84.97
SCNpilot_expt_1000_bf_scaffold_19885
Species: Neochlamydia sp. EPS4 (66.67%)
3 2108 bp 37.71 3.80 79.98
SCNpilot_expt_1000_bf_scaffold_72246
Species: Neochlamydia sp. TUME1 (50%)
2 1053 bp 39.03 3.80 101.43
SCNpilot_expt_1000_bf_scaffold_7613
Order: Chlamydiales (57.14%)
7 4543 bp 37.93 3.80 91.53
SCNpilot_expt_1000_bf_scaffold_24333
Domain: Bacteria (66.67%)
3 1775 bp 38.25 3.80 83.83
SCNpilot_expt_1000_bf_scaffold_21502
Order: Chlamydiales (50%)
4 1974 bp 31.00 3.80 59.88
SCNpilot_expt_1000_bf_scaffold_13477
Order: Chlamydiales (50%)
4 2906 bp 39.02 3.79 77.63
SCNpilot_expt_1000_bf_scaffold_31273
Species: Neochlamydia sp. EPS4 (50%)
4 3428 bp 38.36 3.79 53.30
SCNpilot_expt_1000_bf_scaffold_29397
Species: Neochlamydia sp. TUME1 (66.67%)
3 1516 bp 38.98 3.79 88.06
SCNpilot_expt_1000_bf_scaffold_34627
Species: Neochlamydia sp. TUME1 (100%)
1 1322 bp 40.62 3.78 99.85
SCNpilot_expt_1000_bf_scaffold_27843
Species: Neochlamydia sp. TUME1 (50%)
2 1588 bp 39.80 3.78 99.18
SCNpilot_expt_1000_bf_scaffold_26512 3 1654 bp 34.58 3.78 86.15
SCNpilot_expt_1000_bf_scaffold_12305
Order: Chlamydiales (72.73%)
11 10330 bp 36.95 3.78 67.23
SCNpilot_expt_1000_bf_scaffold_14702
Domain: Bacteria (66.67%)
3 2716 bp 37.52 3.77 72.35
SCNpilot_expt_1000_bf_scaffold_22265
Species: Neochlamydia sp. TUME1 (100%)
2 5565 bp 33.46 3.77 34.66
SCNpilot_expt_1000_bf_scaffold_17525
Species: Neochlamydia sp. TUME1 (50%)
4 3516 bp 37.23 3.77 65.87
SCNpilot_expt_1000_bf_scaffold_9868
Order: Chlamydiales (66.67%)
3 3728 bp 36.94 3.76 96.00
SCNpilot_expt_1000_bf_scaffold_21222
Species: Neochlamydia sp. EPS4 (50%)
2 1997 bp 37.91 3.76 99.60
SCNpilot_expt_1000_bf_scaffold_10480
Species: Parachlamydia acanthamoebae (50%)
8 6647 bp 37.26 3.76 68.60
SCNpilot_expt_1000_bf_scaffold_6513
Genus: Neochlamydia (50%)
12 11355 bp 37.05 3.76 75.64
SCNpilot_expt_1000_bf_scaffold_26270
Species: Neochlamydia sp. EPS4 (50%)
2 1666 bp 35.77 3.75 87.52
SCNpilot_expt_1000_bf_scaffold_25927
Domain: Bacteria (62.5%)
8 5861 bp 35.66 3.75 61.53
SCNpilot_expt_1000_bf_scaffold_26144
Genus: Neochlamydia (50%)
4 3204 bp 35.42 3.75 72.28
SCNpilot_expt_1000_bf_scaffold_7306
Order: Chlamydiales (70%)
10 8693 bp 39.60 3.74 94.25
SCNpilot_expt_1000_bf_scaffold_11343
Species: Neochlamydia sp. EPS4 (100%)
1 3339 bp 40.64 3.74 94.34
SCNpilot_expt_1000_bf_scaffold_34133
Species: Neochlamydia sp. TUME1 (50%)
2 1338 bp 39.69 3.74 83.86
Displaying items 251-300 of 578 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.