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SCNPILOT_EXPT_750_P_Sphingobacteriia_41_24

SCNPILOT_EXPT_1000_BF_Sphingobacterium_39_3
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Sphingobacterium  →  Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Displaying items 251-300 of 810 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_30553
Species: Pedobacter sp. V48 (50%)
2 1469 bp 36.83 2.72 96.80
SCNpilot_expt_1000_bf_scaffold_42038
Species: Chryseobacterium gleum (50%)
2 1655 bp 38.07 2.72 86.47
SCNpilot_expt_1000_bf_scaffold_45210
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 1012 bp 39.62 2.72 77.67
SCNpilot_expt_1000_bf_scaffold_30482
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 1471 bp 42.01 2.72 99.93
SCNpilot_expt_1000_bf_scaffold_33348
Genus: Sphingobacterium (50%)
4 2568 bp 36.72 2.73 82.24
SCNpilot_expt_1000_bf_scaffold_42332
Species: Sphingobacterium sp. ML3W (100%)
1 1100 bp 38.82 2.73 99.82
SCNpilot_expt_1000_bf_scaffold_15379
Order: Flavobacteriales (50%)
4 3115 bp 37.59 2.73 87.26
SCNpilot_expt_1000_bf_scaffold_26622
Species: Sphingobacterium sp. PM2-P1-29 (100%)
2 1648 bp 45.02 2.73 96.30
SCNpilot_expt_1000_bf_scaffold_42412
Species: Sphingobacterium paucimobilis (100%)
1 1097 bp 39.56 2.73 97.08
SCNpilot_expt_1000_bf_scaffold_42439
Genus: Sphingobacterium (100%)
3 1097 bp 39.02 2.73 85.05
SCNpilot_expt_1000_bf_scaffold_39276
Species: Sphingobacterium sp. ML3W (100%)
1 1189 bp 41.63 2.73 99.66
SCNpilot_expt_1000_bf_scaffold_45347
Species: Sphingobacterium sp. ML3W (100%)
2 1008 bp 35.91 2.73 80.65
SCNpilot_expt_1000_bf_scaffold_33283 4 1822 bp 36.00 2.74 85.95
SCNpilot_expt_1000_bf_scaffold_17247
Species: Sphingobacterium sp. ML3W (50%)
2 2374 bp 36.14 2.74 81.13
SCNpilot_expt_1000_bf_scaffold_14562
Genus: Sphingobacterium (66.67%)
3 2734 bp 49.34 2.74 99.30
SCNpilot_expt_1000_bf_scaffold_42466
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1096 bp 42.15 2.74 93.34
SCNpilot_expt_1000_bf_scaffold_33350
Species: Sphingobacterium sp. ML3W (100%)
2 1364 bp 38.56 2.75 99.85
SCNpilot_expt_1000_bf_scaffold_30882
Species: Sphingobacterium spiritivorum (50%)
2 1454 bp 41.95 2.75 53.85
SCNpilot_expt_1000_bf_scaffold_26824
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1637 bp 41.23 2.75 99.88
SCNpilot_expt_1000_bf_scaffold_36254
Species: Pedobacter heparinus (100%)
1 1275 bp 42.59 2.75 87.53
SCNpilot_expt_1000_bf_scaffold_42624
Species: Sphingobacterium sp. PM2-P1-29 (100%)
3 1091 bp 42.25 2.75 98.17
SCNpilot_expt_1000_bf_scaffold_26842
Phylum: Bacteroidetes (66.67%)
3 1636 bp 37.65 2.75 70.60
SCNpilot_expt_1000_bf_scaffold_42650
Species: Chryseobacterium piperi (50%)
2 1090 bp 39.08 2.75 97.71
SCNpilot_expt_1000_bf_scaffold_30930
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1452 bp 37.33 2.75 80.17
SCNpilot_expt_1000_bf_scaffold_30941
Species: Sphingobacterium sp. ML3W (100%)
1 1452 bp 33.54 2.75 44.21
SCNpilot_expt_1000_bf_scaffold_17347
Genus: Sphingobacterium (100%)
3 2364 bp 42.22 2.75 79.57
SCNpilot_expt_1000_bf_scaffold_39582
Species: Sphingobacterium spiritivorum (100%)
2 1809 bp 33.55 2.76 50.91
SCNpilot_expt_1000_bf_scaffold_36409
Species: Sphingobacterium sp. ML3W (100%)
1 1270 bp 46.22 2.76 99.92
SCNpilot_expt_1000_bf_scaffold_39595
Species: Sphingobacterium spiritivorum (50%)
2 1179 bp 38.51 2.76 73.03
SCNpilot_expt_1000_bf_scaffold_39643
Phylum: Bacteroidetes (50%)
4 1178 bp 34.13 2.76 93.97
SCNpilot_expt_1000_bf_scaffold_36473
Species: Sphingobacterium sp. ML3W (100%)
1 1269 bp 40.82 2.76 99.76
SCNpilot_expt_1000_bf_scaffold_67113
Species: Sphingobacterium paucimobilis (100%)
2 1085 bp 41.01 2.76 100.65
SCNpilot_expt_1000_bf_scaffold_31301
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 2082 bp 37.18 2.76 23.49
SCNpilot_expt_1000_bf_scaffold_33482
Species: Sphingobacterium sp. ML3W (50%)
2 1359 bp 41.43 2.76 99.12
SCNpilot_expt_1000_bf_scaffold_56519
Species: Sphingobacterium paucimobilis (50%)
2 1354 bp 41.29 2.77 49.19
SCNpilot_expt_1000_bf_scaffold_27056
Species: Spirosoma radiotolerans (100%)
1 1626 bp 42.93 2.77 96.13
SCNpilot_expt_1000_bf_scaffold_36705
Species: Sphingobacterium spiritivorum (100%)
1 1262 bp 40.65 2.77 92.00
SCNpilot_expt_1000_bf_scaffold_25398
Genus: Sphingobacterium (60%)
5 2254 bp 34.69 2.77 65.75
SCNpilot_expt_1000_bf_scaffold_27137
Species: Parabacteroides distasonis (50%)
2 1622 bp 35.45 2.77 71.58
SCNpilot_expt_1000_bf_scaffold_42872
Species: Dyadobacter fermentans (50%)
2 1083 bp 40.44 2.77 55.96
SCNpilot_expt_1000_bf_scaffold_31218
Genus: Sphingobacterium (66.67%)
3 1442 bp 40.08 2.77 95.49
SCNpilot_expt_1000_bf_scaffold_39773
Genus: Sphingobacterium (66.67%)
3 1174 bp 34.67 2.77 63.88
SCNpilot_expt_1000_bf_scaffold_36624
Species: Sphingobacterium paucimobilis (50%)
2 1264 bp 39.24 2.77 89.24
SCNpilot_expt_1000_bf_scaffold_43017
Species: Sphingobacterium paucimobilis (50%)
2 1079 bp 35.22 2.78 83.69
SCNpilot_expt_1000_bf_scaffold_9394
Order: Sphingobacteriales (66.67%)
3 3871 bp 42.31 2.78 93.39
SCNpilot_expt_1000_bf_scaffold_27166
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1620 bp 41.85 2.78 95.19
SCNpilot_expt_1000_bf_scaffold_25474
Species: Sphingobacterium spiritivorum (50%)
2 1709 bp 38.39 2.78 82.68
SCNpilot_expt_1000_bf_scaffold_25505
Species: Myroides odoratimimus (50%)
2 1707 bp 36.91 2.78 80.67
SCNpilot_expt_1000_bf_scaffold_42949
Species: Sphingobacterium spiritivorum (100%)
1 1081 bp 46.25 2.78 99.63
SCNpilot_expt_1000_bf_scaffold_27237
Species: Flavihumibacter petaseus (100%)
1 1616 bp 37.93 2.78 99.88
Displaying items 251-300 of 810 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.