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SCNPILOT_EXPT_750_P_Flavobacteriia_40_20

SCNPILOT_EXPT_1000_BF_Flavobacterium_38_4
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Flavobacterium  →  Flavobacteriales  →  Flavobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_1000_bf_UNK

Properties

Avg. coverage: 3.72 Longest contig: 4.97 Kbp Bin length: 665.50 Kbp GC content: 38.25 %
Contigs count: 415 Features count: 970 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 15 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Displaying items 251-300 of 415 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_41666
Species: Flavobacterium sp. KMS (50%)
2 1120 bp 44.82 2.23 97.77
SCNpilot_expt_1000_bf_scaffold_44019
Species: Flavobacterium enshiense (50%)
2 1049 bp 33.65 3.57 48.62
SCNpilot_expt_1000_bf_scaffold_40812
Species: Flavobacterium branchiophilum (50%)
2 1145 bp 32.14 3.49 88.30
SCNpilot_expt_1000_bf_scaffold_35504
Species: Flavobacterium sp. KMS (50%)
2 1296 bp 34.95 3.86 99.07
SCNpilot_expt_1000_bf_scaffold_22827
Species: Nonlabens dokdonensis (50%)
2 1877 bp 37.40 2.66 89.66
SCNpilot_expt_1000_bf_scaffold_32875
Species: Flavobacterium sp. AED (50%)
2 1380 bp 39.86 2.54 100.44
SCNpilot_expt_1000_bf_scaffold_42117
Species: Flavobacterium cauense (50%)
2 1106 bp 39.78 2.94 98.19
SCNpilot_expt_1000_bf_scaffold_23551
Species: Flavobacterium beibuense (50%)
2 1825 bp 39.84 3.15 77.59
SCNpilot_expt_1000_bf_scaffold_37983
Species: Flavobacterium rivuli (50%)
2 1226 bp 39.40 3.26 94.70
SCNpilot_expt_1000_bf_scaffold_39451
Species: Flavobacterium suncheonense (50%)
2 1183 bp 37.45 3.59 100.93
SCNpilot_expt_1000_bf_scaffold_31492
Species: Elizabethkingia meningoseptica (50%)
2 1431 bp 42.35 3.49 82.81
SCNpilot_expt_1000_bf_scaffold_40830
Species: Ralstonia phage RSL1 (50%)
2 1145 bp 34.85 2.84 88.82
SCNpilot_expt_1000_bf_scaffold_31496
Species: Capnocytophaga sp. oral taxon 329 (50%)
2 1431 bp 28.86 3.84 77.99
SCNpilot_expt_1000_bf_scaffold_32638 2 1388 bp 38.90 2.70 98.13
SCNpilot_expt_1000_bf_scaffold_28039
Species: Flavihumibacter petaseus (100%)
2 1579 bp 29.26 3.80 95.38
SCNpilot_expt_1000_bf_scaffold_43879
Species: Flavobacterium rivuli (50%)
2 1053 bp 38.37 3.32 86.32
SCNpilot_expt_1000_bf_scaffold_53771
Species: GWF1_Flavobacteria_32_7_curated (50%)
2 1332 bp 43.09 3.94 100.00
SCNpilot_expt_1000_bf_scaffold_18536
Species: Flavobacterium hydatis (50%)
2 2797 bp 40.72 3.22 98.89
SCNpilot_expt_1000_bf_scaffold_27946
Species: Flavobacterium saliperosum (50%)
2 1583 bp 40.81 2.84 92.67
SCNpilot_expt_1000_bf_scaffold_31250
Species: Flavobacterium suncheonense (50%)
2 1441 bp 40.67 3.64 95.14
SCNpilot_expt_1000_bf_scaffold_39978
Species: Flavobacterium sp. CF136 (50%)
2 1169 bp 39.01 2.78 99.57
SCNpilot_expt_1000_bf_scaffold_34484
Species: Flavobacterium cauense (100%)
2 1327 bp 40.92 2.07 91.56
SCNpilot_expt_1000_bf_scaffold_33925
Species: Flavobacterium limnosediminis (50%)
2 1345 bp 35.99 2.79 63.12
SCNpilot_expt_1000_bf_scaffold_16973
Species: Acidobacterium capsulatum (50%)
2 2407 bp 30.29 3.12 99.58
SCNpilot_expt_1000_bf_scaffold_26101
Species: Chryseobacterium soli (50%)
2 1675 bp 41.73 3.13 90.99
SCNpilot_expt_1000_bf_scaffold_35022
Species: Flavobacterium beibuense (50%)
2 1310 bp 35.11 3.05 85.19
SCNpilot_expt_1000_bf_scaffold_35791
Species: Flavobacterium suncheonense (50%)
2 1288 bp 37.89 3.11 90.61
SCNpilot_expt_1000_bf_scaffold_45984
Species: Flavobacterium saliperosum (50%)
2 1470 bp 41.70 2.38 100.00
SCNpilot_expt_1000_bf_scaffold_32394
Species: Myroides odoratus (50%)
2 1396 bp 38.25 3.40 87.25
SCNpilot_expt_1000_bf_scaffold_35026
Species: Flavobacterium hydatis (50%)
2 1310 bp 38.32 2.29 74.89
SCNpilot_expt_1000_bf_scaffold_45275
Species: Flavobacterium sp. MEB061 (100%)
2 1010 bp 32.57 3.96 80.50
SCNpilot_expt_1000_bf_scaffold_22348
Species: Tamlana nanhaiensis (50%)
2 1911 bp 33.33 2.49 80.22
SCNpilot_expt_1000_bf_scaffold_36292
Species: Flavobacterium cauense (50%)
2 1274 bp 37.83 3.14 83.83
SCNpilot_expt_1000_bf_scaffold_33165
Species: Pedobacter sp. NL19 (50%)
2 1369 bp 46.75 3.65 98.61
SCNpilot_expt_1000_bf_scaffold_39222
Species: Myroides odoratus (50%)
2 1190 bp 36.05 3.15 94.03
SCNpilot_expt_1000_bf_scaffold_36294
Species: Flavobacterium suncheonense (50%)
2 1274 bp 38.23 4.32 87.83
SCNpilot_expt_1000_bf_scaffold_53825
Species: Flavobacterium subsaxonicum (50%)
2 1609 bp 35.43 3.42 37.48
SCNpilot_expt_1000_bf_scaffold_45024
Species: Flavobacterium enshiense (100%)
2 1018 bp 38.31 1.96 93.42
SCNpilot_expt_1000_bf_scaffold_42925
Species: Flavobacterium enshiense (100%)
2 1082 bp 37.99 3.23 59.89
SCNpilot_expt_1000_bf_scaffold_30438
Species: Flavobacterium suncheonense (50%)
2 1472 bp 45.24 2.21 96.60
SCNpilot_expt_1000_bf_scaffold_40096
Species: Flavobacterium aquatile (50%)
2 1627 bp 25.14 3.53 61.03
SCNpilot_expt_1000_bf_scaffold_31785
Species: Flavobacterium suncheonense (50%)
2 1419 bp 38.90 2.47 83.51
SCNpilot_expt_1000_bf_scaffold_41721
Species: Flavobacterium enshiense (100%)
2 1119 bp 36.82 2.68 90.62
SCNpilot_expt_1000_bf_scaffold_32154
Species: Chryseobacterium taiwanense (50%)
2 1405 bp 25.41 2.67 99.93
SCNpilot_expt_1000_bf_scaffold_40866
Species: Flavobacterium hydatis (100%)
2 1144 bp 38.64 3.06 97.81
SCNpilot_expt_1000_bf_scaffold_43396
Species: GWF1_Flavobacteria_32_7_curated (50%)
2 1488 bp 39.72 2.35 97.38
SCNpilot_expt_1000_bf_scaffold_36309
Species: Flavobacterium columnare (50%)
2 1273 bp 40.77 2.75 94.50
SCNpilot_expt_1000_bf_scaffold_35048 2 1310 bp 39.08 3.82 86.56
SCNpilot_expt_1000_bf_scaffold_28840
Species: Chryseobacterium sp. StRB126 (50%)
2 1541 bp 39.20 2.92 84.10
SCNpilot_expt_1000_bf_scaffold_22370
Species: Flavobacterium cauense (50%)
2 1910 bp 41.20 2.62 100.52
Displaying items 251-300 of 415 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.