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SCNPILOT_EXPT_750_P_Flavobacteriia_40_20

SCNPILOT_EXPT_1000_BF_Flavobacterium_38_4
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Flavobacterium  →  Flavobacteriales  →  Flavobacteriia  →  Bacteroidetes  →  Bacteria

Displaying items 301-350 of 415 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_12325
Genus: Flavobacterium (75%)
4 4132 bp 38.12 2.66 65.56
SCNpilot_expt_1000_bf_scaffold_40292
Species: Flavobacterium cauense (50%)
2 1508 bp 39.12 2.65 59.88
SCNpilot_expt_1000_bf_scaffold_34035
Species: Flavobacterium sp. KMS (50%)
2 2734 bp 35.99 2.65 48.17
SCNpilot_expt_1000_bf_scaffold_54658
Species: Flavobacterium cauense (50%)
2 1225 bp 43.35 2.65 98.45
SCNpilot_expt_1000_bf_scaffold_41090
Species: Flavobacterium rivuli (50%)
2 1137 bp 42.66 2.64 99.74
SCNpilot_expt_1000_bf_scaffold_27283
Species: Solitalea canadensis (50%)
2 1614 bp 35.19 2.63 77.88
SCNpilot_expt_1000_bf_scaffold_41036
Species: Flavobacterium suncheonense (100%)
1 1139 bp 43.46 2.63 72.17
SCNpilot_expt_1000_bf_scaffold_31620
Species: Flavobacterium rivuli (66.67%)
3 1425 bp 42.32 2.63 100.00
SCNpilot_expt_1000_bf_scaffold_31905 4 2189 bp 29.28 2.63 74.69
SCNpilot_expt_1000_bf_scaffold_17952
Genus: Flavobacterium (83.33%)
6 2658 bp 39.16 2.63 94.58
SCNpilot_expt_1000_bf_scaffold_29283
Species: Flavobacterium saliperosum (50%)
2 1522 bp 38.17 2.63 91.06
SCNpilot_expt_1000_bf_scaffold_20092
Genus: Flavobacterium (66.67%)
3 2090 bp 39.71 2.63 88.28
SCNpilot_expt_1000_bf_scaffold_44133
Species: Elizabethkingia anophelis (50%)
2 1046 bp 37.28 2.63 92.35
SCNpilot_expt_1000_bf_scaffold_27116
Species: Chryseobacterium taiwanense (50%)
2 1623 bp 43.93 2.62 85.40
SCNpilot_expt_1000_bf_scaffold_22370
Species: Flavobacterium cauense (50%)
2 1910 bp 41.20 2.62 100.52
SCNpilot_expt_1000_bf_scaffold_50647
Species: Flavobacterium enshiense (66.67%)
3 1435 bp 40.14 2.61 91.57
SCNpilot_expt_1000_bf_scaffold_17222
Species: Sphingobacterium spiritivorum (75%)
4 2981 bp 38.91 2.60 84.54
SCNpilot_expt_1000_bf_scaffold_31092
Species: GWF1_Flavobacteria_32_7_curated (50%)
2 1446 bp 36.45 2.59 100.00
SCNpilot_expt_1000_bf_scaffold_43565
Species: Flavobacterium beibuense (100%)
1 1061 bp 39.21 2.59 99.81
SCNpilot_expt_1000_bf_scaffold_16915
Species: Flavobacterium saliperosum (50%)
4 2414 bp 46.19 2.59 98.55
SCNpilot_expt_1000_bf_scaffold_17835 4 2313 bp 27.50 2.59 93.39
SCNpilot_expt_1000_bf_scaffold_33563
Species: Flavobacterium cauense (100%)
3 1356 bp 36.28 2.58 85.40
SCNpilot_expt_1000_bf_scaffold_40077
Genus: Flavobacterium (66.67%)
3 1166 bp 31.90 2.57 95.45
SCNpilot_expt_1000_bf_scaffold_13405
Species: Flavobacterium saliperosum (50%)
4 2921 bp 36.94 2.57 92.02
SCNpilot_expt_1000_bf_scaffold_30726
Species: Flavobacterium aquatile (66.67%)
3 1461 bp 37.30 2.57 89.53
SCNpilot_expt_1000_bf_scaffold_36427
Species: Joostella marina (50%)
2 1270 bp 36.77 2.56 77.01
SCNpilot_expt_1000_bf_scaffold_26367
Genus: Flavobacterium (66.67%)
3 1661 bp 37.51 2.56 90.49
SCNpilot_expt_1000_bf_scaffold_33226
Genus: Flavobacterium (100%)
3 1368 bp 36.70 2.56 92.98
SCNpilot_expt_1000_bf_scaffold_21628
Species: Flavobacterium limnosediminis (50%)
2 1962 bp 39.09 2.55 86.85
SCNpilot_expt_1000_bf_scaffold_33046
Species: Flavobacterium suncheonense (100%)
1 1374 bp 43.09 2.55 99.78
SCNpilot_expt_1000_bf_scaffold_33047
Species: Flavobacterium enshiense (50%)
2 1374 bp 36.75 2.55 99.56
SCNpilot_expt_1000_bf_scaffold_39618
Species: Flavobacterium limnosediminis (50%)
2 1178 bp 42.36 2.55 99.58
SCNpilot_expt_1000_bf_scaffold_39623
Genus: Flavobacterium (66.67%)
3 1178 bp 38.71 2.55 88.12
SCNpilot_expt_1000_bf_scaffold_32875
Species: Flavobacterium sp. AED (50%)
2 1380 bp 39.86 2.54 100.44
SCNpilot_expt_1000_bf_scaffold_39502
Species: Flavobacterium suncheonense (50%)
2 1182 bp 40.44 2.54 100.76
SCNpilot_expt_1000_bf_scaffold_36091 1 1279 bp 33.15 2.54 39.87
SCNpilot_expt_1000_bf_scaffold_24412
Species: Flavobacterium saliperosum (50%)
2 1770 bp 38.76 2.54 99.49
SCNpilot_expt_1000_bf_scaffold_39368
Species: Flavobacterium saliperosum (100%)
1 1186 bp 40.98 2.53 95.87
SCNpilot_expt_1000_bf_scaffold_32565
Species: Flavobacterium subsaxonicum (100%)
2 1390 bp 42.59 2.52 97.77
SCNpilot_expt_1000_bf_scaffold_39125
Genus: Pedobacter (66.67%)
3 1193 bp 34.03 2.51 85.75
SCNpilot_expt_1000_bf_scaffold_38932
Species: Flavobacterium sp. 316 (50%)
2 1198 bp 41.40 2.50 98.66
SCNpilot_expt_1000_bf_scaffold_32325 3 1398 bp 30.47 2.50 72.96
SCNpilot_expt_1000_bf_scaffold_38903
Genus: Flavobacterium (66.67%)
3 1199 bp 37.45 2.50 98.33
SCNpilot_expt_1000_bf_scaffold_29578
Species: Flavobacterium branchiophilum (50%)
2 1509 bp 36.18 2.49 94.04
SCNpilot_expt_1000_bf_scaffold_23822
Genus: Flavobacterium (100%)
3 1807 bp 38.18 2.49 94.96
SCNpilot_expt_1000_bf_scaffold_22348
Species: Tamlana nanhaiensis (50%)
2 1911 bp 33.33 2.49 80.22
SCNpilot_expt_1000_bf_scaffold_31974
Genus: Flavobacterium (66.67%)
3 1412 bp 35.06 2.48 69.48
SCNpilot_expt_1000_bf_scaffold_38470
Species: Flavobacterium limnosediminis (50%)
2 1213 bp 36.44 2.47 101.65
SCNpilot_expt_1000_bf_scaffold_31785
Species: Flavobacterium suncheonense (50%)
2 1419 bp 38.90 2.47 83.51
SCNpilot_expt_1000_bf_scaffold_25100 3 1729 bp 43.20 2.46 87.28
Displaying items 301-350 of 415 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.