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SCNPILOT_EXPT_1000_BF_Epsilonproteobacteria_40_6_CONTAMINANT

SCNPILOT_EXPT_1000_BF_CG_Epsilon_01_36_6
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: CG_Epsilon_01  →  Epsilonproteobacteria  →  Proteobacteria  →  Bacteria

Description

fragment from TS-ESOM

Displaying items 101-150 of 683 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_13349
Species: CG_Epsilon_01 (100%)
4 2930 bp 37.10 5.46 87.54
SCNpilot_expt_1000_bf_scaffold_13863
Species: CG_Epsilon_01 (100%)
4 2841 bp 35.34 5.90 91.87
SCNpilot_expt_1000_bf_scaffold_30677
Species: CG_Epsilon_01 (100%)
4 1463 bp 37.94 5.30 95.15
SCNpilot_expt_1000_bf_scaffold_20594
Species: CG_Epsilon_01 (100%)
4 2048 bp 35.40 6.23 99.46
SCNpilot_expt_1000_bf_scaffold_22860
Species: CG_Epsilon_01 (100%)
4 1875 bp 37.71 5.87 83.84
SCNpilot_expt_1000_bf_scaffold_23069
Species: CG_Epsilon_01 (100%)
4 1859 bp 36.36 4.98 99.73
SCNpilot_expt_1000_bf_scaffold_23336
Species: CG_Epsilon_01 (75%)
4 1840 bp 37.88 8.29 99.29
SCNpilot_expt_1000_bf_scaffold_9514
Species: CG_Epsilon_01 (100%)
4 3834 bp 40.51 5.28 91.94
SCNpilot_expt_1000_bf_scaffold_16228
Species: CG_Epsilon_01 (100%)
4 2496 bp 34.50 4.41 88.82
SCNpilot_expt_1000_bf_scaffold_10445
Species: CG_Epsilon_01 (100%)
4 3568 bp 38.14 5.75 89.04
SCNpilot_expt_1000_bf_scaffold_15674
Species: CG_Epsilon_01 (100%)
4 2570 bp 35.33 5.64 96.30
SCNpilot_expt_1000_bf_scaffold_22638
Species: CG_Epsilon_01 (100%)
4 1890 bp 36.98 3.84 96.03
SCNpilot_expt_1000_bf_scaffold_8159
Species: CG_Epsilon_01 (100%)
4 4300 bp 37.42 5.99 95.44
SCNpilot_expt_1000_bf_scaffold_26143
Species: CG_Epsilon_01 (100%)
4 1673 bp 38.67 5.53 87.33
SCNpilot_expt_1000_bf_scaffold_19568
Species: CG_Epsilon_01 (100%)
4 2137 bp 34.82 5.50 85.07
SCNpilot_expt_1000_bf_scaffold_15690
Species: CG_Epsilon_01 (100%)
4 2566 bp 36.17 5.65 96.10
SCNpilot_expt_1000_bf_scaffold_22651
Species: CG_Epsilon_01 (75%)
4 1889 bp 33.46 7.15 73.37
SCNpilot_expt_1000_bf_scaffold_25789
Species: CG_Epsilon_01 (100%)
4 1692 bp 37.41 6.94 100.00
SCNpilot_expt_1000_bf_scaffold_20391
Species: CG_Epsilon_01 (100%)
4 2064 bp 35.61 6.18 82.99
SCNpilot_expt_1000_bf_scaffold_27239
Species: CG_Epsilon_01 (75%)
4 1616 bp 33.60 5.88 91.71
SCNpilot_expt_1000_bf_scaffold_9808
Species: CG_Epsilon_01 (100%)
4 3746 bp 33.48 6.27 100.19
SCNpilot_expt_1000_bf_scaffold_8691
Species: CG_Epsilon_01 (75%)
4 4101 bp 37.48 5.30 93.64
SCNpilot_expt_1000_bf_scaffold_21067
Species: CG_Epsilon_01 (100%)
4 2010 bp 32.34 7.59 100.75
SCNpilot_expt_1000_bf_scaffold_18110
Species: CG_Epsilon_01 (100%)
4 2281 bp 38.14 5.59 95.09
SCNpilot_expt_1000_bf_scaffold_16554
Species: CG_Epsilon_01 (100%)
3 2456 bp 38.40 4.99 100.77
SCNpilot_expt_1000_bf_scaffold_24442
Species: CG_Epsilon_01 (100%)
3 1768 bp 35.46 6.65 94.51
SCNpilot_expt_1000_bf_scaffold_30514
Species: CG_Epsilon_01 (66.67%)
3 1470 bp 35.99 4.93 100.41
SCNpilot_expt_1000_bf_scaffold_39050
Species: CG_Epsilon_01 (100%)
3 1195 bp 35.48 6.28 88.62
SCNpilot_expt_1000_bf_scaffold_25063
Species: CG_Epsilon_01 (100%)
3 1732 bp 36.72 4.19 100.12
SCNpilot_expt_1000_bf_scaffold_20176
Species: CG_Epsilon_01 (100%)
3 2083 bp 38.98 8.04 94.62
SCNpilot_expt_1000_bf_scaffold_8986
Species: CG_Epsilon_01 (100%)
3 4002 bp 37.88 5.56 98.05
SCNpilot_expt_1000_bf_scaffold_13715
Species: CG_Epsilon_01 (100%)
3 2866 bp 40.33 5.58 98.60
SCNpilot_expt_1000_bf_scaffold_18644
Species: CG_Epsilon_01 (100%)
3 2225 bp 35.10 6.52 97.08
SCNpilot_expt_1000_bf_scaffold_44668
Species: CG_Epsilon_01 (100%)
3 1029 bp 38.97 5.34 91.55
SCNpilot_expt_1000_bf_scaffold_23166
Species: CG_Epsilon_01 (100%)
3 1853 bp 34.92 4.18 93.74
SCNpilot_expt_1000_bf_scaffold_28407
Species: CG_Epsilon_01 (100%)
3 1562 bp 38.73 6.88 97.57
SCNpilot_expt_1000_bf_scaffold_36391
Species: CG_Epsilon_01 (100%)
3 1271 bp 34.70 8.06 78.36
SCNpilot_expt_1000_bf_scaffold_33265
Species: CG_Epsilon_01 (100%)
3 1366 bp 35.36 5.86 101.68
SCNpilot_expt_1000_bf_scaffold_21100
Species: CG_Epsilon_01 (100%)
3 2007 bp 37.32 5.73 99.55
SCNpilot_expt_1000_bf_scaffold_23174
Species: CG_Epsilon_01 (100%)
3 1852 bp 35.58 7.29 95.57
SCNpilot_expt_1000_bf_scaffold_27807
Species: CG_Epsilon_01 (100%)
3 1590 bp 36.73 7.23 92.45
SCNpilot_expt_1000_bf_scaffold_17409
Species: CG_Epsilon_01 (100%)
3 2358 bp 38.93 5.51 94.91
SCNpilot_expt_1000_bf_scaffold_42001
Species: CG_Epsilon_01 (100%)
3 1110 bp 37.93 4.50 90.27
SCNpilot_expt_1000_bf_scaffold_41306
Species: CG_Epsilon_01 (66.67%)
3 1131 bp 27.76 5.75 96.02
SCNpilot_expt_1000_bf_scaffold_37612
Species: CG_Epsilon_01 (100%)
3 1236 bp 32.52 4.25 91.02
SCNpilot_expt_1000_bf_scaffold_16582
Species: CG_Epsilon_01 (100%)
3 2453 bp 37.26 5.50 99.55
SCNpilot_expt_1000_bf_scaffold_35910
Species: CG_Epsilon_01 (100%)
3 1284 bp 37.85 5.84 98.83
SCNpilot_expt_1000_bf_scaffold_39847
Species: CG_Epsilon_01 (100%)
3 1172 bp 34.13 5.55 95.48
SCNpilot_expt_1000_bf_scaffold_24729
Species: CG_Epsilon_01 (100%)
3 1752 bp 35.79 6.28 82.19
SCNpilot_expt_1000_bf_scaffold_27050
Species: CG_Epsilon_01 (100%)
3 1626 bp 35.06 6.00 92.99
Displaying items 101-150 of 683 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.