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SCNpilot_expt_1000_bf_scaffold_21725_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2093..2374

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=2 Tax=Hyphomicrobium denitrificans RepID=D8JYS2_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 82.0
  • Bit_score: 143
  • Evalue 8.70e-32
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 82.0
  • Bit_score: 143
  • Evalue 2.70e-32
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 82.0
  • Bit_score: 143
  • Evalue 1.20e-31

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGTCCGATACCAGCAGCTCGGGTGCAGGCGCGGCGCGCCGGCCCTTCCATCGCCGCCGCAAGACCTGCCCGTTCTCGGGCGAGGGCGCACCGAAGATCGACTACAAGGATGCGCGCCTGCTCGGCCGTTATATCTCCGAGCGCGGCAAGATCGTGCCGAGCCGCATCACGGCCGTCTCGGCCAAGAAGCAGCGTGAGCTCGCCAAGGCGATCAAGCGTGCGCGCTTCCTCGGCCTGTTGCCCTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTAG
PROTEIN sequence
Length: 94
MSDTSSSGAGAARRPFHRRRKTCPFSGEGAPKIDYKDARLLGRYISERGKIVPSRITAVSAKKQRELAKAIKRARFLGLLPYXXXXXXXXXXX*