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SCNpilot_expt_1000_bf_scaffold_8317_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4551..6560)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 668.0
  • Bit_score: 1054
  • Evalue 0.0
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-); K02622 topoisomerase IV subunit B [EC:5.99.1.-] similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 668.0
  • Bit_score: 1054
  • Evalue 0.0
DNA topoisomerase IV subunit B n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036A8560 similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 671.0
  • Bit_score: 1065
  • Evalue 0.0

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2010
ATGGCATCCTCACGTGACCTGTTTGCTAAGCTCGAGGCCGAGTTGACCGATAAACCTCTGCGCGCCCGCAAGAACGGCGATGCGTCCGACGACTATGGCGCCGATCTCATCGAAGTCCTCGAAGGCCTGGAGCCCGTCCGCCGCCGCCCCGGCATGTACATCGGCGGCACCGACGAGAAGGCACTGCACCATCTCTTCGCCGAGGTGATCGACAACTCCATGGACGAGGCCGTGGCCGGCCACGCCACCTGGATCGAGGTGCGTCTCGATGCGGATGGCTTCTTGACCGTCAACGACAACGGCCGCGGCATCCCGATCGACCCGCATCCGAAGTTCAAGAACAAGTCCGCCCTCGAAGTCGTCATGTGCACGCTGCACGCAGGCGGCAAGTTCGACAGCAAGGCCTACCAGACCTCGGGCGGCCTGCACGGCGTCGGCGTGTCGGTCGTCAATGCGCTCTCGGACCACCTCGAGGTCGAGGTAGCGCGTGGCCAGCAGCTCTATCGCATGATCTTCAGCCGCGGCATTCCGCAAACGAAGCTCGAGAAGCTCGGCCAGACCATGAACCGGCGCGGGACCAAGACCCGCTTCCATCCGGACGAGCAGATCTTCGGCAAGGGCGCGACCTTCAAGCCGGCGCGGCTCCTCAAGATGGCGCGCTCGAAGGCGTACCTCTTCGGCGGCGTCGAGATCCGCTGGTCGTGCGATCCTTCGCTCATCAAGGATGACACGCCGGCCGAGGCGACGTTCCATTTCCCAGGTGGCCTCAAGGACTATCTGACCACCTCGATCGAGGGCCAGACGCGCGTCACCAAGGACATCTTCGCCGGCCGTATCGAGAAGAAGGAAGGGCACGGCTCCGTCGAATGGGCCATGTGCTGGGTCAGTGACGAGGACGGCTTCCTGCACTCCTACTGCAATACCGTGCCGACGCCTGAAGGCGGTACGCACGAGCAGGGTCTGCGCAATGCGTTGACGAAGGGCCTGCGCGCCTACGGCGAGCTCACCGGCAGCAAAAAGGCAGGGCAGATCACGGCCGAGGACGTTCTCGGCACGTCCTCCGGTATGCTCTCCGTCTTCATTCGCGAGCCCGAGTTCCAGGGCCAGACCAAGGACCGCCTCGCGACGCAGGAAGCAGCACGCATCGTCGAGAGCGCCGTCCGCGATGCCTTCGACCACTGGCTCGCCGACAGCCCGCAGCAGGCGACGCGTCTCCTCGAGTGGACCATCGACCAGGCCGAGGATCGCCTCAAGCGCCGCCGCGAGAAGGAGATCGGGCGCCAGAACGCGACGCGCAAGCTGCGCCTTCCGGGCAAGCTGATCGATTGCGCCAACACGAGCGGCGACACGGAGATCTTCCTCGTCGAGGGCGATTCGGCCGGCGGCTCGGCCAAGCAGGCGCGCAATCCCAAGACGCAGGCCGTTCTGCCCTTGCGCGGCAAGATCCTCAACGTCGCGAACGCGACGAGCTCCAAGCTCGCGCAGAACCAGCTCCTGACCGATCTGATCACGGCGCTGGGCGTCGGCACAGGCACGAAGTATCGCGACGAGGATCTGCGCTATGACCGCGTGATCGTCATGACGGACGCCGACGTCGACGGCGCGCACATTGCCTCGCTGCTCATCACGTTCTTCTATCAGGAGATGCCGGAGCTGGTTGCGAACGGCCATCTCCATCTCGCGGTGCCGCCGCTTTACCGCCTGACCCAGGGCGGCAAGGTGGTTTACGCTCGCGACGATCGCCACAAGGACCAGCTCATGGAGAGCGAGTTCAAGGGCCGCGGCAAGGTGGATATCACCCGCTTCAAAGGCCTCGGCGAGATGGACTTCAAGGATCTCAAGGTCACGACCATGGATCCGGCGAAGCGCATTCTGCTCCGGGTCGAGGTCGTCGAGGACGAGAAGCCGGCGGTGTCCGACGCCGTGAACGCGCTCATGGGCTCGAAGCCGGAGCTGCGCTTCCGCTTCATCCAGGAGCGGGCGGCTTTCGCCAAGGACCTCGATATTTGA
PROTEIN sequence
Length: 670
MASSRDLFAKLEAELTDKPLRARKNGDASDDYGADLIEVLEGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNSMDEAVAGHATWIEVRLDADGFLTVNDNGRGIPIDPHPKFKNKSALEVVMCTLHAGGKFDSKAYQTSGGLHGVGVSVVNALSDHLEVEVARGQQLYRMIFSRGIPQTKLEKLGQTMNRRGTKTRFHPDEQIFGKGATFKPARLLKMARSKAYLFGGVEIRWSCDPSLIKDDTPAEATFHFPGGLKDYLTTSIEGQTRVTKDIFAGRIEKKEGHGSVEWAMCWVSDEDGFLHSYCNTVPTPEGGTHEQGLRNALTKGLRAYGELTGSKKAGQITAEDVLGTSSGMLSVFIREPEFQGQTKDRLATQEAARIVESAVRDAFDHWLADSPQQATRLLEWTIDQAEDRLKRRREKEIGRQNATRKLRLPGKLIDCANTSGDTEIFLVEGDSAGGSAKQARNPKTQAVLPLRGKILNVANATSSKLAQNQLLTDLITALGVGTGTKYRDEDLRYDRVIVMTDADVDGAHIASLLITFFYQEMPELVANGHLHLAVPPLYRLTQGGKVVYARDDRHKDQLMESEFKGRGKVDITRFKGLGEMDFKDLKVTTMDPAKRILLRVEVVEDEKPAVSDAVNALMGSKPELRFRFIQERAAFAKDLDI*