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SCNpilot_expt_1000_bf_scaffold_5358_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1334..1651)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA5_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 105.0
  • Bit_score: 151
  • Evalue 4.70e-34
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 105.0
  • Bit_score: 153
  • Evalue 1.30e-34
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 105.0
  • Bit_score: 151
  • Evalue 1.50e-34

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 318
ATGTACGCTGTCATCAAGACCGGCGGCAAGCAGTACCGCGTGGCGGCCGACGACGTCCTCACCGTCGAGAAGCTCGCCGGTGAGCCGGGTGCCAAGATCGAATTCGGCGAAGTCCTCATGGTCGGTGGCAACGACACCGGCGTGAAGATCGGCGCGCCTCTCGTCTCGGGTGCCCTCGTCAAGGCCGAGGTCGTCGAGCAGGGTCGCGGCCCGAAGGTCATCGCCTTCAAGAAGCGCCGCCGCAAGAACTCGCGCCGCAAGCGCGGCCATCGTCAGGAGCTGACGACCGTCAAGATCACCGAGATCATCGGCGCCTGA
PROTEIN sequence
Length: 106
MYAVIKTGGKQYRVAADDVLTVEKLAGEPGAKIEFGEVLMVGGNDTGVKIGAPLVSGALVKAEVVEQGRGPKVIAFKKRRRKNSRRKRGHRQELTTVKITEIIGA*