ggKbase home page

SCNpilot_expt_1000_bf_scaffold_22508_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_22508_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..611
DNA (609bp) protein (203aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URP8_9SPHN
Riboflavin biosynthesis protein RibBA {ECO:0000313|EMBL:AKH41493.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
SCNpilot_expt_1000_bf_scaffold_22508_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

813..1319
DNA (507bp) protein (169aa)
4-nitrophenol 4-monooxygenase/4-nitrocatechol 2-monooxygenase, reductase component {ECO:0000313|EMBL:AKH41494.1}; EC=1.14.13.166 {ECO:0000313|EMBL:AKH41494.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative oxidoreductase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMX3_9SPHN
putative reductase component of oxidoreductase
SCNpilot_expt_1000_bf_scaffold_22508_curated_3
unknown

Not on your lists

comp(1323..1430)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_22508_curated_4
unknown

Not on your lists

2125..2736
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_22508_curated_5
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2647..3132)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W958_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX79139.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
copper resistance protein D
SCNpilot_expt_1000_bf_scaffold_22508_curated_6
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3129..3575)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W957_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX81644.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
SCNpilot_expt_1000_bf_scaffold_22508_curated_7
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3595..4344)
DNA (750bp) protein (250aa)
TonB-dependent receptor domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W956_9CAUL
TonB-dependent receptor domain protein {ECO:0000313|EMBL:EDX80968.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
TonB-dependent receptor protein
SCNpilot_expt_1000_bf_scaffold_22508_curated_8
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4335..5807)
DNA (1473bp) protein (491aa)
TonB-dependent receptor domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W956_9CAUL
TonB-dependent receptor domain protein {ECO:0000313|EMBL:EDX80968.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
TonB-dependent receptor protein rbh
SCNpilot_expt_1000_bf_scaffold_22508_curated_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5874..6299
DNA (426bp) protein (142aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VG99_SPHWW
CRP/FNR family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABQ71315.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Displaying 9 items

View Taxonomy