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SCNpilot_expt_300_bf_scaffold_17

Search features with annotation key words

Displaying items 61-90 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_17_61
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(63266..63889)
DNA (624bp) protein (208aa)
trmD; tRNA(m1G37)methyltransferase Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
tRNA (guanine-N(1)-)-methyltransferase id=2442427 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
tRNA (guanine-N(1)-)-methyltransferase
SCNpilot_expt_300_bf_scaffold_17_62
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(64075..64485)
DNA (411bp) protein (137aa)
RNA-binding protein (Contains KH domain)-like protein (Fragment) id=2442438 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_63
unknown

Not on your lists

comp(64560..64946)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_64
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(65364..65744)
DNA (381bp) protein (127aa)
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000313|EMBL:AJA06577.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
30S ribosomal protein S16 id=2442440 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
SCNpilot_expt_300_bf_scaffold_17_65
Pestalotiopsis fici, Pestalotiopsis, Xylariales, Xylariomycetidae, Ascomycota, Fungi

Not on your lists

comp(65845..66825)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003823034
Uncharacterized protein {ECO:0000313|EMBL:ETS84947.1}; TaxID=1229662 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Xylariomycetidae; Xylariales; Amphisphaeriaceae; P
hypothetical protein
SCNpilot_expt_300_bf_scaffold_17_66
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(66874..67575)
DNA (702bp) protein (234aa)
Ribonuclease 3 id=3133429 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Ribonuclease 3 {ECO:0000313|EMBL:KKW03616.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
Ribonuclease 3
SCNpilot_expt_300_bf_scaffold_17_67
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(67575..68084)
DNA (510bp) protein (170aa)
NUDIX hydrolase id=3133427 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
NUDIX hydrolase Tax=GWC2_TM7_48_9
hypothetical protein
SCNpilot_expt_300_bf_scaffold_17_68
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(68044..68514)
DNA (471bp) protein (157aa)
N utilization substance protein B homolog n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLY2_9BACT
putative transcription termination factor Tax=CG_TM7_01
putative transcription termination factor
SCNpilot_expt_300_bf_scaffold_17_69
unknown

Not on your lists

68889..69431
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_70
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(69446..71872)
DNA (2427bp) protein (809aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=813 species="Bacteria; Chlamydiae
Leucine--tRNA ligase id=2442454 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
leucine--tRNA ligase
SCNpilot_expt_300_bf_scaffold_17_71
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(71902..73185)
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
id=5226843 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_72
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

73235..74269
DNA (1035bp) protein (345aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2) Tax=CG_TM7_01
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PY42_9BACT rbh
SCNpilot_expt_300_bf_scaffold_17_73
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74259..74990)
DNA (732bp) protein (244aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_expt_300_bf_scaffold_17_74
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

75462..75785
DNA (324bp) protein (108aa)
RNP-1 like RNA-binding protein Tax=CG_TM7_01
RNP-1 like RNA-binding protein id=2442671 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
RNP-1 like protein RNA-binding protein
SCNpilot_expt_300_bf_scaffold_17_75
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(75835..76194)
DNA (360bp) protein (120aa)
Putative uncharacterized protein id=3133410 bin=GWC2_TM7_48_9 species=Actinosynnema mirum genus=Actinosynnema taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Putative uncharacterized protein Tax=GWC2_TM7_48_9
hypothetical protein
SCNpilot_expt_300_bf_scaffold_17_76
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(76207..78222)
DNA (2016bp) protein (672aa)
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2) Tax=GWC2_TM7_44_17_curated
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase id=2442724 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
SCNpilot_expt_300_bf_scaffold_17_77
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(78206..79267)
DNA (1062bp) protein (354aa)
conserved membrane protein of unknown function Tax=CG_TM7_01
Putative uncharacterized protein id=2442727 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
SCNpilot_expt_300_bf_scaffold_17_78
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(79251..80126)
DNA (876bp) protein (292aa)
htpX; membrane protease (EC:3.4.24.-) Tax=GWC2_TM7_44_17_curated
protease HtpX id=2442730 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
protease
SCNpilot_expt_300_bf_scaffold_17_79
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(80162..80725)
DNA (564bp) protein (188aa)
LemA-like protein id=2442733 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_17_80
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

81124..82401
DNA (1278bp) protein (426aa)
putative HtrA2 peptidase (EC:3.4.21.108) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
protease Do id=4358070 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
protease Do
SCNpilot_expt_300_bf_scaffold_17_81
unknown

Not on your lists

82442..83599
DNA (1158bp) protein (386aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_82
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(83596..85959)
DNA (2364bp) protein (788aa)
Membrane transport protein id=2444210 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane transport protein Tax=GWC2_TM7_44_17_curated
mmpL3; putative drug exporter of the RND superfamily
SCNpilot_expt_300_bf_scaffold_17_83
unknown

Not on your lists

86064..86639
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_84
GWE2_OD1_31_40, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

86739..87506
DNA (768bp) protein (256aa)
Peptidase E Tax=GWE2_OD1_31_40
Peptidase S51 dipeptidase E id=1899007 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
SCNpilot_expt_300_bf_scaffold_17_85
unknown

Not on your lists

comp(87593..88096)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_86
unknown

Not on your lists

comp(88234..88554)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_17_87
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(88876..89568)
DNA (693bp) protein (231aa)
Oxidoreductase FAD/NAD(P)-binding domain protein id=2442930 bin=GWC2_TM7_44_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
FAD-binding oxidoreductase Tax=GWC2_TM7_44_17_curated
oxidoreductase FAD/NAD(P)-binding component
SCNpilot_expt_300_bf_scaffold_17_88
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(89589..91499)
DNA (1911bp) protein (637aa)
Putative copper-exporting P-type ATPase B {ECO:0000313|EMBL:AGL61870.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AGL61870.1};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimon
copB; putative copper-exporting P-type ATPase B (EC:3.6.3.4)
Putative copper-exporting P-type ATPase B n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PUP1_9BACT rbh
SCNpilot_expt_300_bf_scaffold_17_89
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(91639..92337)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLZ2_9BACT
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AGL61869.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_expt_300_bf_scaffold_17_90
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(92745..93029)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVU4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL61867.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Displaying items 61-90 of 309 in total

View Taxonomy