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SCNpilot_expt_300_bf_scaffold_330_31

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 36530..37123

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 29 subunit, SigE n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETP2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.1
  • Coverage: 187.0
  • Bit_score: 138
  • Evalue 7.70e-30
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 193.0
  • Bit_score: 285
  • Evalue 1.40e-74
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AIE85602.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimon similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 193.0
  • Bit_score: 285
  • Evalue 7.10e-74

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGCAAACCATCGAAGCTCCGGTTGAATTTCAGGCAGGGAGAAGCGATCTTGATTTCGAGCGATTCGAAGACATGATCTCATCTCATAAGAGACGGGCCTACAGCATGGCGCTTCAACTTACACGCAACACCTCCGACGCGGAGGACCTGATGCAGGACACGTTCGTGAAAGCATGGCGTGGCTTTGACAGCTACATGCCCGGTCGTCCTTTCCTCAACTGGCTTCTGCGCATCATGCAGCGAGCCTATCTCGACACCCGGCGTCGAGACAATCCGATTCGAAAAGCCGAGTCCTTGAACTCGATGATCTCGCCCAGCGATGGCGACGTACAGGAACTTCCGATTCCGGACAGTGGCGCGGGACCAGATGAAGAAGTTTTCTATCGCGAATGGACTACCCAGCTCCATGCCGCTCTCGATCAATTGCCGGAGGTCTATCGGACGGCGATTGTGATGTGCGATTTGGAGAGCATGAGTTACGGGGAGATTGCCGATGCTCAAAACACAACGGTAGGAACCGTTCGCTCACGGATCCATCGCGGAAGAAAGATGCTTCGAGACATCTGCCAAAGGTCAGGCATTCGCATCCCCTAA
PROTEIN sequence
Length: 198
MQTIEAPVEFQAGRSDLDFERFEDMISSHKRRAYSMALQLTRNTSDAEDLMQDTFVKAWRGFDSYMPGRPFLNWLLRIMQRAYLDTRRRDNPIRKAESLNSMISPSDGDVQELPIPDSGAGPDEEVFYREWTTQLHAALDQLPEVYRTAIVMCDLESMSYGEIADAQNTTVGTVRSRIHRGRKMLRDICQRSGIRIP*