ggKbase home page

SCNpilot_expt_300_bf_scaffold_25656_1

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(2..847)

Top 3 Functional Annotations

Value Algorithm Source
Putative nucleotide-binding protein containing TIR-like domain-containing protein n=1 Tax=Pseudomonas sp. GM78 RepID=J3ISS9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 282.0
  • Bit_score: 433
  • Evalue 1.30e-118
  • rbh
Putative nucleotide-binding protein containing TIR-like domain-containing protein {ECO:0000313|EMBL:EJN35063.1}; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 282.0
  • Bit_score: 433
  • Evalue 1.80e-118
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 282.0
  • Bit_score: 317
  • Evalue 3.70e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. GM78 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGCCGAAGCCCCGTGTTTTCATTGGTTCATCAGTTGAAGGACTCAATGTCGCTTATGCCGTACAGCAGAACCTTTTGCACGAAGCTGAGGTAACGGTCTGGGACCAGGGTGTCTTTGAGTTGTCTCGCACAACAATGGAATCCCTAACTAAGGCTCTTTCCGACAGCGACTTCGCTATCTTCGTTTTCTCATTAGACGATCTGGTTCGCATAAGGGATCTCACTGCGCCTGCAGTTAGAGATAACGTGCTTTTCGAGTTTGGCCTTTTCATAGGAAAACTCGGGAGGGAGCGAGTGTTCTTCTTGCTCCCATCCGACGGTGATCTTCACTTGCCTACCGACCTCCTGGGCGTTACGCCTGGACGGTATGAATCAGCCCGTACTGACGGCAGCATGCAAGCGGCAACAGGCGCAGTGTGCCATCAAATCCGGTTGCAGATGAAGACGCTTGGTGTGGTTCCCGGAAGAGTTGGCGTCGATGCAAGTACCGAAGGTGGGAGCGTAGATAAATCAGGTAAACGTCATTGGATATTCGATTTCTTTGACAAGGAGTATGTCAATGCAAAGGCAACCCTCGAAAGCGAACTAATGAATCAGTCGGGGGAAGATGCGCTCACCTCAAAAGCTTGGATTCTCTATTGCGAGCTCAAACAGCGAAATAACAGCAGTACCGATGAGCTAACTAGCTTTGCTGCCGAGCAACTTGACTCTTCTAAAATCCAGTCTCTCGTCGCAGCGTTTCTCCGTTGGGAAGGCTACGCAAGCAAAGCAATTCAGCTCCTGGTCGCGGCGCAAGCGAAGAGGCCAAAGGACGCAACCATTGCAAAGGCACTCGCCTTATGCCAT
PROTEIN sequence
Length: 282
MPKPRVFIGSSVEGLNVAYAVQQNLLHEAEVTVWDQGVFELSRTTMESLTKALSDSDFAIFVFSLDDLVRIRDLTAPAVRDNVLFEFGLFIGKLGRERVFFLLPSDGDLHLPTDLLGVTPGRYESARTDGSMQAATGAVCHQIRLQMKTLGVVPGRVGVDASTEGGSVDKSGKRHWIFDFFDKEYVNAKATLESELMNQSGEDALTSKAWILYCELKQRNNSSTDELTSFAAEQLDSSKIQSLVAAFLRWEGYASKAIQLLVAAQAKRPKDATIAKALALCH