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SCNpilot_expt_300_bf_scaffold_1589_1

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(28..1083)

Top 3 Functional Annotations

Value Algorithm Source
pggt1b, MGC89595, bggi, ggti; protein geranylgeranyltransferase type I, beta subunit (EC:2.5.1.59); K11713 geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 348.0
  • Bit_score: 314
  • Evalue 5.70e-83
  • rbh
MGC89595 protein n=1 Tax=Xenopus tropicalis RepID=Q66IH6_XENTR similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 348.0
  • Bit_score: 314
  • Evalue 1.80e-82
  • rbh
Protein geranylgeranyltransferase type I, beta subunit {ECO:0000313|EMBL:CAJ81920.1}; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 348.0
  • Bit_score: 314
  • Evalue 2.60e-82

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Taxonomy

Xenopus (Silurana) tropicalis → Xenopus → Anura → Amphibia → Chordata → Metazoa

Sequences

DNA sequence
Length: 1056
ATGAATCTTTTATCTCTCAACGATATGCCACAAAGAATCAATCCAACTTTTCTTTATTCAATGCATAGAAAATATTTTACACGTTGTCTAACCGTTTTACCAGCACATACAAGTTCGTTAGATAACAGTCGTTTAACGATCGTTTTCTATAGTCTTGCTGGTCTTGACATTCTTCGAGCGATACCAGACGCATTACCAATCAACAAAACCGAAATCATCACTTGGATTTACAATTTACAATTGATACGTGATTCAAATGTGTCAGGTTTTCGTGGCTCATCATGTGCGATCGGCTCTCGAACAGATTTCAATCCTTACGATCAAGTTCATATAACAATGACGATGACAGGACTCTTGTCTTTATTGATCTTAGATGATGATCTCGAACGAGTACAACGAAAACAAATAGCATCATCACTTCGATATCTTCAATTGCCAACAGGCTCATTTCTTGCAACATGTCTATCAAAAGAAAATGATCTTCGATTTGTTTATTGTGCATGTGTTGTAGCATATATTTTAAATGATTGGTCAGGTATCGATCAAGATCTATGTACAAAATTTATTCTCAATTGTCGAACATATGAATATGCATTTGGACAAGTGCCCGGTGCTGAAGCTCATGGTGGTTCGACTTATTGTGCTCTTGCATCGTTATATTTAATGAATCGTTTGAATCAATTAGATCATCAAGATGATTTAGTACGTTGGTGTTTACAAAAACAAGACGAAGGTTTTCATGGACGACCAAATAAACCCGATGATTCATGTTATTCATGGTGGATTGGTGCAACATTGAAAATTCTTGATAAATATTCGTTGATTAATTATGAAGAAAATGAACGATTTCTCTCAGCAACTGAATCAAAAGTAACCGGTGGTTTTAGTAAATTACCTGATTCATCAGCAGATCCATTACATTCGTATTTAAGTTTAGCAAGTTTATCATTACATTCGAATGACAATTTGAAATCGATTCATCCAGCTTTAATGGTTGACGAAAATATTGTTAATCGATTAAAAACAGTTTTACATCCGAAATGGATAAATGAATAA
PROTEIN sequence
Length: 352
MNLLSLNDMPQRINPTFLYSMHRKYFTRCLTVLPAHTSSLDNSRLTIVFYSLAGLDILRAIPDALPINKTEIITWIYNLQLIRDSNVSGFRGSSCAIGSRTDFNPYDQVHITMTMTGLLSLLILDDDLERVQRKQIASSLRYLQLPTGSFLATCLSKENDLRFVYCACVVAYILNDWSGIDQDLCTKFILNCRTYEYAFGQVPGAEAHGGSTYCALASLYLMNRLNQLDHQDDLVRWCLQKQDEGFHGRPNKPDDSCYSWWIGATLKILDKYSLINYEENERFLSATESKVTGGFSKLPDSSADPLHSYLSLASLSLHSNDNLKSIHPALMVDENIVNRLKTVLHPKWINE*