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SCNpilot_expt_300_bf_scaffold_1433_4

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(5376..6455)

Top 3 Functional Annotations

Value Algorithm Source
Huntingtin n=1 Tax=Crassostrea gigas RepID=K1RMW1_CRAGI similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 335.0
  • Bit_score: 118
  • Evalue 1.20e-23
Huntingtin {ECO:0000313|EMBL:EKC42935.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostr similarity UNIPROT
DB: UniProtKB
  • Identity: 28.7
  • Coverage: 335.0
  • Bit_score: 118
  • Evalue 1.60e-23
SLC6A4, HTT; solute carrier family 6 (neurotransmitter transporter, serotonin), member 4; K04533 huntingtin similarity KEGG
DB: KEGG
  • Identity: 27.4
  • Coverage: 343.0
  • Bit_score: 114
  • Evalue 6.80e-23

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Taxonomy

Crassostrea gigas → Crassostrea → Ostreoida → Pteriomorphia → Mollusca → Metazoa

Sequences

DNA sequence
Length: 1080
CAATTATTAATTCACGATGAAACCGACGAAACTGTTCATCGTTTAGACACATTTTCCTATTTAAATTTTCTCAGTGAATATTTTCAACATCTTTCAACATTTTCTATTTGTCTTCTCCTTCAATGGACACATATACTCAATATACTCGATTACACACAAGAATCATGGTGGTCAGCCATGTTAACCATACCTATGTCAAATTCTCCTATGACTCATCTTGCACTTACTGGACAATTGCAATCCTATTGTGATCTTATTTGTCGACATGAGCTCTATGTCGAACATTTAACATCTATATTAACACAACGATATTTACTCTATTTATTATTCGAACAAAGTGATACATGTTCGTATGTACATAATCTATTCGGTTTAATTCATCGGACATCAGCTGCTAGTCATTTATTTGTTGAATCGATTTATACGAATTGGGATTATTTATTAAAATCGAATCCTATTTTATTATCATTGAAAATTCTTCGAACATTAGAAAGTATACATTTAGATGAAAGTGGATTGTTACTTGTTCTTTTAATTGAACAATTTCTAACTCTACCCTATCTTGCTATTCTACGTTTAGCTGAATTAATTATCTGTCGACGTATTGAAATGATGTTAACATTCGATGAAAATATATTAATTCAACAATTAATGCCTAAACATTTACCATCAATTCTTCAGAATCTTTCGAAACAAAATCAACAGAATTTAAATAAACATGATTTGAAAAGTAATGAACATCTATATGCATTAATACAACGTTTAATAACGAAAATCAATTATGATTCATCGAATATATCAATCGAACGAACAAAACAAGATTTCGTATTTAATTTGAATTCAAATGATGAAGATTTCATTTTAAATTGGATCAAACATGTTCATTGTCCAATTGATGTCACACCGAAAGTCTATGCACAAATGTTAAAAAATGTTGCCTATAAAAAACTCCTACCATTCATGATGTCACCTGTAAATAAAAACAAAAAAAAACTTCTTGATTTACGTATCGATTTTGTGTTTATTTCTTCTAGGATTTTATTTGGTTATCAATGCCTGATTGTCTTCTGCTTGCAATAA
PROTEIN sequence
Length: 360
QLLIHDETDETVHRLDTFSYLNFLSEYFQHLSTFSICLLLQWTHILNILDYTQESWWSAMLTIPMSNSPMTHLALTGQLQSYCDLICRHELYVEHLTSILTQRYLLYLLFEQSDTCSYVHNLFGLIHRTSAASHLFVESIYTNWDYLLKSNPILLSLKILRTLESIHLDESGLLLVLLIEQFLTLPYLAILRLAELIICRRIEMMLTFDENILIQQLMPKHLPSILQNLSKQNQQNLNKHDLKSNEHLYALIQRLITKINYDSSNISIERTKQDFVFNLNSNDEDFILNWIKHVHCPIDVTPKVYAQMLKNVAYKKLLPFMMSPVNKNKKKLLDLRIDFVFISSRILFGYQCLIVFCLQ*