ggKbase home page

SCNpilot_expt_300_bf_scaffold_3318_4

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(1411..1575)

Top 3 Functional Annotations

Value Algorithm Source
Mitochondrial elongation factor Tu1 n=1 Tax=Strongyloides ratti RepID=Q0EEG2_STRRB similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 49.0
  • Bit_score: 70
  • Evalue 7.20e-10
Mitochondrial elongation factor Tu1 {ECO:0000313|EMBL:BAF31896.1}; TaxID=34506 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloid similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 49.0
  • Bit_score: 70
  • Evalue 9.90e-10
elongation factor Tu similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 33.0
  • Bit_score: 65
  • Evalue 4.90e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Strongyloides ratti → Strongyloides → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 165
ATGTCAATGATCAATGCATATTTTCGTCGATGTCTTGCTCAAGTTGTTGTAGAAAAGAAAACATACAAACGTGATAAACCACATATAAATATAGGTACGATTGGTCATGTTGATCATGGTAAAACAACTTTAACTGCTGCTATTACTCGAAGTAAGATTGAATAA
PROTEIN sequence
Length: 55
MSMINAYFRRCLAQVVVEKKTYKRDKPHINIGTIGHVDHGKTTLTAAITRSKIE*