ggKbase home page

SCNpilot_expt_300_bf_scaffold_1635_1

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 2..967

Top 3 Functional Annotations

Value Algorithm Source
GK16383 gene product from transcript GK16383-RA; K11978 E3 ubiquitin-protein ligase UBR3 [EC:6.3.2.19] similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 343.0
  • Bit_score: 188
  • Evalue 4.30e-45
E3 ubiquitin-protein ligase UBR3 n=1 Tax=Crassostrea gigas RepID=K1PI18_CRAGI similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 343.0
  • Bit_score: 215
  • Evalue 8.10e-53
E3 ubiquitin-protein ligase UBR3 {ECO:0000313|EMBL:EKC23612.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostre similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 343.0
  • Bit_score: 215
  • Evalue 1.10e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Crassostrea gigas → Crassostrea → Ostreoida → Pteriomorphia → Mollusca → Metazoa

Sequences

DNA sequence
Length: 966
AATATGTTTCGAAGTGTTGGCGGCGGTATATGTGATTGTGGAGATGTAACTGTAATGAATTCGAATGGATTTTGTAAACAACATGGACCGAATCGAATACCCAATCAGCCAATACCATCGACACTGATTCGATCTGCACAAATTGTTCTACCACGATTAATTCTTCGACTCGTTCAACATCTACGTAGTCATGCATCGTCATTGAAAACTGAATCAGATAGCTATACTAGCATTGAAGAATTTCATTCATTAACATCTCTATTCGATCTATTTGACAGTCTTTGTGAAAATGGTTCAACAATTCGTTCGATTCTAATTGATTCTCTTCTCAACACTGAATCATACAAACCAAATGATATTTATCTCAAACAATTGCATGCAACATCAAGCTTGTCTATTCCTCTATCATTACGTTCTGATAGTCTATCGATTGATTTCGAAATCAAACAAGCGAATTGTCTATTAGATGAATTACTTTTCTGGTTAATTAAATACGAAATACCTGAACGATTATTGAAAATCTTACTCATGTTATTAACTAATTCGAATTTCAAAGAAATATTTTCTCGATCATTTCTAAATGTTTATCCAATGGCAATTCAACAGTCGATTGATTCTCGTCAACGAATGCATACATATCGACTTGTACACATTAGTGTACAACTATTTTCCAATCAAGATATAACTATTCGTGCAATAAAAGAATTTCATCTATTTGAAATCATACTCTCAGCTCTATTCGCTATTTTTTCGAATATTTTAACTAATTGTCAATTAGAAAATTCTCGAGAAAATTATCATTTAACTATATCTGAAACAGATTTTTCGAAGAAAATGCACTATTGGTCAATTGTTTCGGATCTCGTCAATATTCTCTCGCATGAATATGCAAGTCGAATATTTCTATCCGAGAAACGATTTTTAATTACATGGATTCAAATACTTAATTGGTTTCAAGGTAATTAA
PROTEIN sequence
Length: 322
NMFRSVGGGICDCGDVTVMNSNGFCKQHGPNRIPNQPIPSTLIRSAQIVLPRLILRLVQHLRSHASSLKTESDSYTSIEEFHSLTSLFDLFDSLCENGSTIRSILIDSLLNTESYKPNDIYLKQLHATSSLSIPLSLRSDSLSIDFEIKQANCLLDELLFWLIKYEIPERLLKILLMLLTNSNFKEIFSRSFLNVYPMAIQQSIDSRQRMHTYRLVHISVQLFSNQDITIRAIKEFHLFEIILSALFAIFSNILTNCQLENSRENYHLTISETDFSKKMHYWSIVSDLVNILSHEYASRIFLSEKRFLITWIQILNWFQGN*