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SCNpilot_expt_300_bf_scaffold_3560_7

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(4393..4692)

Top 3 Functional Annotations

Value Algorithm Source
Putative adaptor protein pacsin n=1 Tax=Corethrella appendiculata RepID=U5EYM2_9DIPT similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 54.0
  • Bit_score: 69
  • Evalue 1.70e-09
Uncharacterized protein {ECO:0000313|EMBL:KFD51501.1}; TaxID=68888 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichuridae; Trichuris.;" source="Trichuris s similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 54.0
  • Bit_score: 70
  • Evalue 1.80e-09
GL24280 gene product from transcript GL24280-RA similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 54.0
  • Bit_score: 67
  • Evalue 3.50e-09

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Taxonomy

Trichuris suis → Trichuris → Trichocephalida → Dorylaimia → Nematoda → Metazoa

Sequences

DNA sequence
Length: 300
ATGGATACAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATAACAGAAAAAAAACGAAACGAAGCCATTCGATGTTTTCAGATTGGAAAATATAGTCGTGTCGTAAAACGTTGTGAAGATGGAAATAAACTCACTAGTGATCTCGCTAGTATGATAAGCGAACGAGCTGAATTAGAAAAGTCCTTTTCGAAAATGCTAAAAAGTTGGTCGAAAAAATGGTCGGATTATATTGTAAAATGTAGGCAAACTAAGCGAATGAAAACAACAACACATATCTCGTGA
PROTEIN sequence
Length: 100
MDTIXXXXXXXXXXXXXXKITEKKRNEAIRCFQIGKYSRVVKRCEDGNKLTSDLASMISERAELEKSFSKMLKSWSKKWSDYIVKCRQTKRMKTTTHIS*