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SCNpilot_expt_300_bf_scaffold_7040_2

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(2656..4215)

Top 3 Functional Annotations

Value Algorithm Source
Low density lipoprotein n=1 Tax=Adineta vaga RepID=G3KGV9_ADIVA similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 505.0
  • Bit_score: 325
  • Evalue 1.20e-85
Low density lipoprotein {ECO:0000313|EMBL:AEN94416.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 505.0
  • Bit_score: 325
  • Evalue 1.60e-85

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Taxonomy

Adineta vaga → Adineta → Adinetida → Bdelloidea → Rotifera → Metazoa

Sequences

DNA sequence
Length: 1560
TTGAGAGATACAATTTTGTATTTATATCAAATTGACTATGAACCAACAAGTTTGACATGTTATGTGCATTTAAAATGTAATCGAGGCTCGAAATCGATCTGTCTCGATTGGACAGAAATTTGTGATCAATATGTTCATTGTGTCGATGATCAAGCTGATGAGAAACTTTGCGGACAATTATTAATCAATGAATGTCATGAAAATGAATATCGATGTCGAAATGGGCAATGTATTTCGAAGGAATTCGTTTTCGACGAACCGAATGTTTACGAATGTTTCGATCGGTCCGATCATTTTGCCACTGGTCAATTAAAGTTAGGCCACGAAAAAACTTATTTCGAACCAAGAATCAATTACGAAGATCAAGCCTGTATAAAAATCGATCCTAACATTAAATTTACATTGCAGGTTACAATCTCGAGTTCATGTGATCCGTCACGATATAATCTTCTCAAAATAGCCATGTACAATGACGTACCAACAACAATATCGCATATTTGTTATATTTCATTCTATTGTATGTTCTATCGCGAAGCATCTCGACATTTCTTATGTCTGGATATTTGCGAAAATGACCAATGTATATTACAGATCAGTGAAACATGTCCAGATTTGATCGTGATCGTGCCAGCACCTATTGCATTCGGTCATGTTTCTTTTGGTTATTTTAAGCAAACGGATAGATATTCAGTTCTACGCGTTCCAGATTTTATTTGCTACGATGTTGAACTTTGCCGAAATTTCCAATCGAATAATAATGTGACAGTATTTCAATATAATAATCAAACGTGTCGTTTGACTCAAGATATTCTACCGAGTTTTTTCATTTCGGGACGATTCGTTTCGACATTGGGTGAACATATCAATGCATTGCAGAAAGGTCTTCAACGTTGTAATACTATTTCTTTTGAAAATACGAATATTTGCACGAATCGATTTATGTATCGTTGCAAAAATTCAACTGAATGCATTTCAATACATCGTCTTTGCAATCAAATCTACGATTGTGATTATGGTGATGATGAAGATTGTCAATTAATCGATGGCGTTTGCTCACCAATAGACTCAGATTTACTTTTTAAATGTCCATTGAATAACATATGCATATCTCCGAGTAGATTCGGCAATAACATGTGCGATTGTGAGTACGTTAGAGGAGACGAAAAACAATTATGCGAAGATGAACCAGCGAGTACATGTCAGACAGATACGATTCATGAATGTAACGGGTTTGCACAAGAAGATATCATACAAAAAACAATTTCATTTTCAACAATTTGCGATGGACATCAAGAATTAACATCGATTCCGATCGATGGAATGAATCATACCGATGAAAGTGAATGTCAATTTTGGCCATGTAACAATTCCTACACGCACTGTGATGGATATTGGAATTGTTGGAATGGAATCGATGAAATTAATTGTGATGAAAAACCAGTAATCAATTGTTCATTGCATCATCATATTTGTATCGAACCAGGGACATTTAAATTAATATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTATAA
PROTEIN sequence
Length: 520
LRDTILYLYQIDYEPTSLTCYVHLKCNRGSKSICLDWTEICDQYVHCVDDQADEKLCGQLLINECHENEYRCRNGQCISKEFVFDEPNVYECFDRSDHFATGQLKLGHEKTYFEPRINYEDQACIKIDPNIKFTLQVTISSSCDPSRYNLLKIAMYNDVPTTISHICYISFYCMFYREASRHFLCLDICENDQCILQISETCPDLIVIVPAPIAFGHVSFGYFKQTDRYSVLRVPDFICYDVELCRNFQSNNNVTVFQYNNQTCRLTQDILPSFFISGRFVSTLGEHINALQKGLQRCNTISFENTNICTNRFMYRCKNSTECISIHRLCNQIYDCDYGDDEDCQLIDGVCSPIDSDLLFKCPLNNICISPSRFGNNMCDCEYVRGDEKQLCEDEPASTCQTDTIHECNGFAQEDIIQKTISFSTICDGHQELTSIPIDGMNHTDESECQFWPCNNSYTHCDGYWNCWNGIDEINCDEKPVINCSLHHHICIEPGTFKLICXXXXXXXXXXXXXXXXRL*