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SCNpilot_expt_300_bf_scaffold_4398_1

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 2..4768

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Chromodomain-helicase-DNA-binding protein 4 n=1 Tax=Clonorchis sinensis RepID=G7Y3P7_CLOSI similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 999.99
  • Bit_score: 1607
  • Evalue 0.0
  • rbh
Chromodomain-helicase-DNA-binding protein 4 {ECO:0000313|EMBL:GAA47583.1}; TaxID=79923 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 999.99
  • Bit_score: 1607
  • Evalue 0.0
helicase similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 555.0
  • Bit_score: 258
  • Evalue 1.50e-65

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Taxonomy

Clonorchis sinensis → Clonorchis → Opisthorchiida → Digenea → Platyhelminthes → Metazoa

Sequences

DNA sequence
Length: 4767
GACGAAATCGGCTACGAAACCAATCATCAAGATTTCTGCGAAGTTTGTCAACAAGGTGGCGAAATTATTCTTTGCGATACATGTCCGAAAGCGTATCATCTCGTTTGTCTCGATCCTGAACTCGAACAAGCACCGGAAGGCGATTGGTCGTGTCCCGAATGTACGAAGAACGGTATTTCGATTCAAACTCGACAAGCAGCTGCCATCGCTGCTGCACGACAAGCCAAAGAAGAAGATGATAATCACATGGAATACTGTCGAGTCTGTCGAGATGGTGGCGAATTGTTATGTTGCGATCGATGTCCATCATCGTATCATATGCATTGTTTAATACCGCCGATGACGGTTATTCCTGAAGACGATTGGTTTTGTCCGCGTTGTACGATTGAACCGCCACCACATGTGGTCAAGAAGATTTTGACTTGGCGATGGGTGACACATCCCGATCCGCATTCATCGGTCACAACTGATACGACGACAACGGAAGTGACGAAAGTCGATGAAAATGGTGAAACTGCAACGACGACAACGACGATCGTTGAAAAACATACGATTACAACAACAACAAATCCCGATGCCGTACCGCCANNNNNNNNNNNNNNNNNNNNNNNNGTGCCAACTTACGATCTTAGTGGCCCACCAGGTGCACCTCGAGGTCCGCCGAAAACACGAGAATTCTTCGTGAAATACGACAGTCTATCGTATTGGACATGCGAATGGTTGCCTGAGCTACAAGTTGAAGTTCATCAATCGTCATTATGGCGTTGTTATATTAAGAAAATCGGCGATGCTAAACAACCGCAGCCGACAGTCGATGCCGATGGCGAAGGCGAAGCCGAAGAAGACGACGAAGTCTCACGACGTTACTACAATCCGAAATTAGAAGCACGATATTACAAAAACGGCGTTCGTCCCGAATGGTTATGCGTTCATCGTATTTTAAATCATCAAAAGGAAAAAGGTCAACCAATGTATTATCTCGTTAAATGGCGAGAACTCGGCTACGAACAAGCCACATGGGAACTCGAAAAAGGCGGCGAATACACGGATCAAGTCGAAAATTGGCAGCAGCATATTGATAACTATTGGAAATTACGAAATGGTGCCGATGGCGAAGAGAAAAAGAAGAAAAAAGGCGGTGCATCGAAGTCAACTCGTCGATCGAATCGTGATCACGATGAAGCTCGCTTGGCCGATGGCGATTCCGGCGACGAAGAACGTACCGGCAAATATCCGCCACCACGTAAACGCTACGAAAAACAGCCCGATTTCATCGATGCAACCGGCGGTACACTTCATCCGTATCAATTAGAAGGCTTAAACTGGTTACGTTATTCATTTGCTCAGAATACCGATGTCATTCTCGCCGATGAAATGGGTCTCGGTAAAACCGTGCAGACCATTGTTTTTCTTCAGGCTCTTCTCAAAGAAGGTCTTTCGCGTGGTCCGTTTCTTGTCAGTGCGCCATTGGCGACGATTATCAATTGGGAACGTGAGTTTGAATTTTGGGCGCCGGATATGTACGTTGTGACGTACACGGGCGATAGAGAAGCACGTTCGGTGATTCGTAAACATGAATTTTCGTTCGAAGACGACGCTATTCGTGCTGGTCCACGAGCTAGTCGTGTAAAAACAGGTGCCAAAGTGAAATTTCACGCGTTGTTAACATCGTACGAGTTGGTTAGCGTCGATTCGGCAACACTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAGTTATCGATGAAGCACATCGTTTGAAAAACAATCAATCACGATTCTTTCGAACATTATTCGAATTTAATATTGGCTACAAAGTGTTGTTGACTGGTACACCATTGCAAAATAATTTAGAAGAACTTTATCATTTATTGAACTTTTTAAAACCTGATAAATTCAGTGATATGGACGGATTTTTAAAGGAGTTTAGTGATTTAGCTAAAGATGAACAAGTTGCCAAGTTACATGATATCTTAGGTTCGCATATGCTACGTCGTTTGAAAGCTGATGTTTTGAAAAATATGCCATCGAAATCGGAATTCATCGTTCGAGTTGATTTAAGTCCTTTGCAAAAGAAATACTATCGAGCTATTTTAACAAAAAATTTCGATGCATTGAATGTCAAAGGCGGTGGTGCACAAGTATCATTATTAAATATTGTTATGGAATTAAAAAAATGTACGAATCATCCGTATCTTCTACCAGCTGGTGAATTCGAAGCACCATTAACAGCTACGAAGGCTTATGAAGGTTCAGCTTTAATAAAAGCGAGTGGTAAATTAGAATTATTAGCGACAATGTTAAAAAAATTAAAAGAACAAGGACATCGTGTTTTAATTTTTTCGCAAATGACACGAATGTTAGATATTCTTGAAGATTTTCTCGAATACATGGGCTATAAATACGAACGTATGGATGGCAAAACAAGTGGCACCGATCGACAAGATGCTATCGATCGTTTTAATGCACCAGGTGCTGAACAATTTTGTTTTCTTCTTTCGACACGTTCAGGTGGTTTGGGTATTAATCTTGCAACAGCTGATACAGTTATTATTTACGATAGTGATTGGAATCCACATAATGATATTCAAGCTCTTTCTCGTGCACATCGTATTGGTCAACAGAATAAAGTTATGATCTATCGATTTGTTACTCGTAGTTCAGTCGAAGAACGTATTACACAAGTAGCCAAGAAGAAAATGATGTTAACACATTTAGTCGTTCGTCCAGGTGTTGGTCGCGGTACAAATATGAGCAAGAAACAACGCGATGAGATTCTACGTTTTGGTACCGAAGATCTCTTCAAAGAAGATGAAGAAATAGCTGCTACAACTGAAGGTGGCGAAAGTGCTAGTAGTGCACGAATTCATTACGATGATGCTGCTATTGAAAAGCTACTTGATCGTTCACAAGAAGGCATACAAGAGAAAGAAGATGGTTTGAATGAATATTTGTCAAGTTTCAAAGTTGCATCGTATGCGACACGAGAAATGAATGATGATGAAGAAGATGATTTTCGTGAACAACCACAAGCTGTCGAAGAAGCTTTAGATCCGAATTATTGGGAGAAATTATTACGTCTTCAATTTGAACAGGATCGAGAAACGGAAAGTTTAGCCTATGGCAAAGGTAAACGTATTAAACGACATGTGAATTATGTTGTTTCAACGAATGATGACAATTGGAACGAACATAACTCGGATATTGCAAGTGAATATGATGCGCCATCGGCTGGTGGCGAAGATGAAGATGTTGATTTTGATGAAACATCCGATCGTCGACGTAAAACAGGTCGTGATCGACCGTTACCACCATTGATATCGAAATCGGGTACGAATATCGAAATCTTAGGTTTCAATCCTCGACAACGTAAAGCATTTTTAAATGCCATCTTACGTTTCGGTATTCCGCCGCCAGATGCATTCAAATCTCAATGGTTAGTTCGTGATTTACGTTGTAAATCCGAGAAAGAATTTCGTGCATATGTTTCATTATTTATGAAACATTTATGCGAAAATACAACCGATAATTCGGAAACATTTTCCGATGGTGTACCACGTGAAGGTCTATCGAGGCATCAAGTTCTCTCACGTATTGGTATTATGTCATTGATAAGAAAGAAAGTTCAAGAATTCGAAAGTATTAATGGATCTTGGTCGATACCCTCACAAACGCCGCCTAGTGAAGAACCGAAAGATATTAAACCGAATACGACAAGTGAAACAGCAAATGTTGAAGTTAAAAATGAACCATTAACACAAAGTGCATCGAGTAATGATTTAATTGGCGAATCGATGAGTTTAAGTGATTTAATTAATAATAAAAATGAAACTGAAAATGAAAATGAAATCGAAATGAAAGATGCGAGTGTCAAATCTGAAGCTACTGAAACAAACCCCGATACAATTGCTGCCGATGCTCCTCCAGCAACGACTGAATCAACAAAATCATCGAATAAAAAATCTCAATCAATTCGTAATGAAAAATTAAAAGATTTCAAATTCATGTTCAACATTGCCGATGGTGGTTTTACTGAACTTCATTCCTTATGGTTAAATGAGCAACGTGCATTAACGCCAAATCATGAATTAGATATTTGGCATCGTCGTCATGATTATTGGCTATTAGCTGGCATTGTTACACATGGTTATTCGCGTTGGCAAGATATTCAAAGTGATCCGAAATTTTCGATTATTAACGAACCATTTAAAATGGATATGATGAAAGGAAATTTTCTTGAAATCAAGAATAAATTTCTTGCACGACGTTTTAAATTATTAGAACAGGCACTTGTTATCGAAGAACAATTACGTCGAGCTGCTTTTCTTGGTCTTGCTATGGAACAAACCAATCCAGCATTGACACTTTCACAACGTTTTAGTGAAGTCGAATGTTTAGCTGAATGTCATCAACATTTATCGAAAGAATCTTTATCAGGAAATAAACCAGCTAATACAGTTCTTAATAAAGTTTTAACACAATTAGAAGAATTATTAAATGATATGAAACAAGAAATTAATAAACTACCAGCAACATTAGCTCGTCTACCTCCGGTTTCACAACGATTAAAAATGTCCGAAACGAATATTGTTTCACGTCTATCAAATGGACAAAATCCTCCTCCTCCTCCTCCTCCTTCAACAACTACAACAGCAACAACAAATGGTAATGAATATCCATACACGAATTATTCCAATTTTATCGGACCGTTTTCTTTGAATTCGAATGGATCAAGTTCATCAACAAAACCAAGTAAATAA
PROTEIN sequence
Length: 1589
DEIGYETNHQDFCEVCQQGGEIILCDTCPKAYHLVCLDPELEQAPEGDWSCPECTKNGISIQTRQAAAIAAARQAKEEDDNHMEYCRVCRDGGELLCCDRCPSSYHMHCLIPPMTVIPEDDWFCPRCTIEPPPHVVKKILTWRWVTHPDPHSSVTTDTTTTEVTKVDENGETATTTTTIVEKHTITTTTNPDAVPPXXXXXXXXVPTYDLSGPPGAPRGPPKTREFFVKYDSLSYWTCEWLPELQVEVHQSSLWRCYIKKIGDAKQPQPTVDADGEGEAEEDDEVSRRYYNPKLEARYYKNGVRPEWLCVHRILNHQKEKGQPMYYLVKWRELGYEQATWELEKGGEYTDQVENWQQHIDNYWKLRNGADGEEKKKKKGGASKSTRRSNRDHDEARLADGDSGDEERTGKYPPPRKRYEKQPDFIDATGGTLHPYQLEGLNWLRYSFAQNTDVILADEMGLGKTVQTIVFLQALLKEGLSRGPFLVSAPLATIINWEREFEFWAPDMYVVTYTGDREARSVIRKHEFSFEDDAIRAGPRASRVKTGAKVKFHALLTSYELVSVDSATLXXXXXXXXXXXXLVIDEAHRLKNNQSRFFRTLFEFNIGYKVLLTGTPLQNNLEELYHLLNFLKPDKFSDMDGFLKEFSDLAKDEQVAKLHDILGSHMLRRLKADVLKNMPSKSEFIVRVDLSPLQKKYYRAILTKNFDALNVKGGGAQVSLLNIVMELKKCTNHPYLLPAGEFEAPLTATKAYEGSALIKASGKLELLATMLKKLKEQGHRVLIFSQMTRMLDILEDFLEYMGYKYERMDGKTSGTDRQDAIDRFNAPGAEQFCFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQALSRAHRIGQQNKVMIYRFVTRSSVEERITQVAKKKMMLTHLVVRPGVGRGTNMSKKQRDEILRFGTEDLFKEDEEIAATTEGGESASSARIHYDDAAIEKLLDRSQEGIQEKEDGLNEYLSSFKVASYATREMNDDEEDDFREQPQAVEEALDPNYWEKLLRLQFEQDRETESLAYGKGKRIKRHVNYVVSTNDDNWNEHNSDIASEYDAPSAGGEDEDVDFDETSDRRRKTGRDRPLPPLISKSGTNIEILGFNPRQRKAFLNAILRFGIPPPDAFKSQWLVRDLRCKSEKEFRAYVSLFMKHLCENTTDNSETFSDGVPREGLSRHQVLSRIGIMSLIRKKVQEFESINGSWSIPSQTPPSEEPKDIKPNTTSETANVEVKNEPLTQSASSNDLIGESMSLSDLINNKNETENENEIEMKDASVKSEATETNPDTIAADAPPATTESTKSSNKKSQSIRNEKLKDFKFMFNIADGGFTELHSLWLNEQRALTPNHELDIWHRRHDYWLLAGIVTHGYSRWQDIQSDPKFSIINEPFKMDMMKGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAFLGLAMEQTNPALTLSQRFSEVECLAECHQHLSKESLSGNKPANTVLNKVLTQLEELLNDMKQEINKLPATLARLPPVSQRLKMSETNIVSRLSNGQNPPPPPPPSTTTTATTNGNEYPYTNYSNFIGPFSLNSNGSSSSTKPSK*